RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CPNE4Q96A23 557 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 TUBGCP3Q96CW5 907 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 Q96MF0 132 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 TACO1Q9BSH4 297 aaKnown RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 MECRQ9BV79 373 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ROPN1BQ9BZX4 212 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ACTR6Q9GZN1 396 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ROPN1Q9HAT0 212 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 NGBQ9NPG2 151 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 CARD8Q9Y2G2 431 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 GPC6Q9Y625 555 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 HEATR5AQ86XA9 2040 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF195O14628 629 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 DSCAMO60469 2012 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 C6orf47O95873 294 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 LINGO3P0C6S8 592 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ELK4P28324 431 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 AGTR1P30556 359 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 SLC7A1P30825 629 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 CCKARP32238 428 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ATP12AP54707 1039 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 SUMO3P55854 103 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF117Q03924 483 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 PTGR1Q14914 329 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 CD226Q15762 336 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 PGS1Q32NB8 556 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 TMEM176BQ3YBM2 270 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 KLHL26Q53HC5 615 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 C6orf136Q5SQH8 315 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 DCST2Q5T1A1 773 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 STAC2Q6ZMT1 411 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF704Q6ZNC4 412 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ZCCHC23Q6ZST2 131 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 TMCO5AQ8N6Q1 288 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 RFWD2Q8NHY2 731 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 POC1BQ8TC44 478 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 COQ8BQ96D53 544 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 PLPPR2Q96GM1 343 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ADGRG7Q96K78 797 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 NPAS1Q99742 590 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 C1orf50Q9BV19 199 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 DUSP26Q9BV47 211 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 BHLHE41Q9C0J9 482 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 OR10A4Q9H209 315 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 SIRT3Q9NTG7 399 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-202ENST00000337571 SLC17A7Q9P2U7 560 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 GIMAP2Q9UG22 337 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 DTNAQ9Y4J8 743 aa9.52□□□□□ -0.89
CAPN3-202ENST00000337571 ACANP16112 2415 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 H7C1Q1 480 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF264O43296 627 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 KLF4O43474 513 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 SKAP2O75563 359 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-202ENST00000337571 LY6G6DO95868 133 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 HEXAP06865 529 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 THBDP07204 575 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 YES1P07947 543 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 NUDT17P0C025 328 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 PSMB1P20618 241 aaKnown RBP9.51□□□□□ -0.89
CAPN3-202ENST00000337571 MATN1P21941 496 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 IL32P24001 234 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 SOAT1P35610 550 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-202ENST00000337571 CCR4P51679 360 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 FOXF1Q12946 379 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 CBFBQ13951 182 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 CAPRIN1Q14444 709 aaKnown RBP9.51□□□□□ -0.89
CAPN3-202ENST00000337571 XKR7Q5GH72 579 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 CBLN3Q6UW01 205 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 NUDCD3Q8IVD9 361 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 KRTCAP2Q8N6L1 136 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 PSMA8Q8TAA3 256 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 SFXN5Q8TD22 340 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 NUDT8Q8WV74 236 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 HSD17B8Q92506 261 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 MARK4Q96L34 752 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 MRGPRX4Q96LA9 322 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 OR7D2Q96RA2 312 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 ESRP2Q9H6T0 727 aaKnown RBP9.51□□□□□ -0.89
CAPN3-202ENST00000337571 CXorf36Q9H7Y0 433 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 GP6Q9HCN6 339 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 SERINC1Q9NRX5 453 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 ZDHHC2Q9UIJ5 367 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 ICAM5Q9UMF0 924 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 ACTL7BQ9Y614 415 aa9.51□□□□□ -0.89
CAPN3-202ENST00000337571 NPIPA5A0A0B4J1W7 369 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 NPIPA7E9PJI5 369 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 EIF4E2O60573 245 aaKnown RBP9.5□□□□□ -0.89
CAPN3-202ENST00000337571 TMCC2O75069 709 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 STX11O75558 287 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms