RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RCBTB1Q8NDN9 531 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 PROKR2Q8NFJ6 384 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 OR2T33Q8NG76 320 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 OR4K13Q8NH42 304 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 RIT1Q92963 219 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 MOAP1Q96BY2 351 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 BPIFA2Q96DR5 249 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 RBM18Q96H35 190 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 ZNF764Q96H86 408 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 GDF15Q99988 308 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SLC30A2Q9BRI3 323 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TTYH1Q9H313 450 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 PALMDQ9NP74 551 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 FSCN3Q9NQT6 498 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 H2AFY2Q9P0M6 372 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 CFL2Q9Y281 166 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 OR10H1Q9Y4A9 318 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TP53BP1Q12888 1972 aaPredicted RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 HYKKA2RU49 373 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 UNC119BA6NIH7 251 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TNFSF14O43557 240 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 FOXS1O43638 330 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 MRPS14O60783 128 aaKnown RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 KCNJ13O60928 360 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 PIPP12273 146 aaPredicted RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 NID1P14543 1247 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 IL9P15248 144 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 NR4A2P43354 598 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 MAGEB1P43366 347 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 EFNB1P98172 346 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SLC3A1Q07837 685 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 CBX3Q13185 183 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 CRMP1Q14194 572 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 C1orf189Q5VU69 101 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ARL9Q6T311 187 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 RANBP3LQ86VV4 465 aaPredicted RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 MARCH9Q86YJ5 346 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ZPLD1Q8TCW7 415 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ZMYND19Q96E35 227 aaPredicted RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 DIRAS2Q96HU8 199 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 FOXN4Q96NZ1 517 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SLC38A3Q99624 504 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 PPIL3Q9H2H8 161 aaKnown RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 KLHL1Q9NR64 748 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 PNO1Q9NRX1 252 aaKnown RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 POT1Q9NUX5 634 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SCML1Q9UN30 329 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SPACA6W5XKT8 324 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 LRP4O75096 1905 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 A0A1B0GWA3 101 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TRAPPC13A5PLN9 417 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ZNF670-ZNF695F2Z2N8 137 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SYT5O00445 386 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 WISP1O95388 367 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 GSTM3P21266 225 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 E2F1Q01094 437 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 MLLT11Q13015 90 aaPredicted RBP8.18□□□□□ -1.1
SNCA-201ENST00000336904 MEDAGQ5VYS4 303 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TTLL10Q6ZVT0 673 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 SSX6Q7RTT6 188 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ZNRF4Q8WWF5 429 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 GAL3ST4Q96RP7 486 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 BCL7BQ9BQE9 202 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TBCCD1Q9NVR7 557 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 CALML5Q9NZT1 146 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 TNFRSF10DQ9UBN6 386 aa8.18□□□□□ -1.1
SNCA-201ENST00000336904 A0A0B4J203 849 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 A0A1W2PQ09 198 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TNFRSF10CO14798 259 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 SNPHO15079 494 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 AQP9O43315 295 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 OIP5O43482 229 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 ASNA1O43681 348 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 HPGDSO60760 199 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 ATP1B1P05026 303 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 PEPDP12955 493 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 ZNF10P21506 573 aaPredicted RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 FPR3P25089 353 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 IFNGR2P38484 337 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 RPS27P42677 84 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 RORCP51449 518 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 OR10A3P58181 314 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 RUNX1T1Q06455 604 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 P2RY14Q15391 338 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 DECR1Q16698 335 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TIMM50Q3ZCQ8 353 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 ALG10BQ5I7T1 473 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 AADACL4Q5VUY2 407 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 C19orf48Q6RUI8 117 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 KIRREL2Q6UWL6 708 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TMPRSS11AQ6ZMR5 421 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 RNF44Q7L0R7 432 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CDRT4Q8N9R6 151 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TSLPQ969D9 159 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 DMRTB1Q96MA1 342 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CD180Q99467 661 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms