RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 SLAMF9Q96A28 289 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 RASD1Q9Y272 281 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 C5orf51A6NDU8 294 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CBX7O95931 251 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PRH1P02810 166 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 GABRA1P14867 456 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ITGB8P26012 769 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CAPZBP47756 277 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 OR1D5P58170 312 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 TUBA1BP68363 451 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 TUBA4AP68366 448 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 LEG1Q6P5S2 330 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 TUBA1AQ71U36 451 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 COMMD6Q7Z4G1 85 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ZNF761Q86XN6 746 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MARCH9Q86YJ5 346 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ETFBKMTQ8IXQ9 262 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MINDY2Q8NBR6 621 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 OR56B2PQ8NGI1 322 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 LRR1Q96L50 414 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MED11Q9P086 117 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CACFD1Q9UGQ2 172 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 HIF3AQ9Y2N7 669 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 LOC285095A0A1B0GVY8 99 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 C21orf140B9A014 251 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ZNF264O43296 627 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CLIC3O95833 236 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MT-ATP6P00846 226 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ELAVL4P26378 380 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 AK4P27144 223 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PRDX3P30048 256 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PTGER4P35408 488 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MAGEA2P43356 314 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PGFP49763 221 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CDKN2DP55273 166 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 NPRL3Q12980 569 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 EIF2B1Q14232 305 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 VMACQ2NL98 169 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CES4AQ5XG92 561 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 AMIGO2Q86SJ2 522 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 RNF113BQ8IZP6 322 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 SLC30A3Q99726 388 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 NTMT1Q9BV86 223 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 MED28Q9H204 178 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CEP290O15078 2479 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 SIPA1L1O43166 1804 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 CCDC163A0A0D9SF12 145 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ZCWPW2A0A1B0GU75 182 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 AURKAO14965 403 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ITM2AO43736 263 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 AOAHP28039 575 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 RPL34P49207 117 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 GSK3BP49841 420 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 SUMO3P55854 103 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 SNRPD2P62316 118 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 ZNF684Q5T5D7 378 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 NMD3Q96D46 503 aaKnown RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PHF12Q96QT6 1004 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 GLRX2Q9NS18 164 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 RPH3AQ9Y2J0 694 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
EPHA3-201ENST00000336596 PLOD2O00469 737 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 OR7A10O76100 309 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 GNAO1P09471 354 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 AMY2BP19961 511 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 MAOBP27338 520 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 SEMA3BQ13214 749 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 KIAA1614Q5VZ46 1190 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 THAP6Q8TBB0 222 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 WFDC5Q8TCV5 224 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 RFT1Q96AA3 541 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
EPHA3-201ENST00000336596 MENTQ9BUN1 341 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 C6orf106Q9H6K1 298 aaPredicted RBP6.87□□□□□ -1.31
EPHA3-201ENST00000336596 IL21Q9HBE4 155 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 TAS2R8Q9NYW2 309 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 TRAV36DV7A0A075B6V5 113 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 ABCD4O14678 606 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 SLC22A1O15245 554 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 DNAJB5O75953 348 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 COX6B1P14854 86 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 AOC1P19801 751 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 EFNA1P20827 205 aaPredicted RBP6.87□□□□□ -1.31
EPHA3-201ENST00000336596 HTR1EP28566 365 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 PDHA2P29803 388 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 MAP2K6P52564 334 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 CATR1Q13166 79 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 PTGR1Q14914 329 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 C6orf136Q5SQH8 315 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 MED25Q71SY5 747 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 ZBTB8AQ96BR9 441 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 IL4I1Q96RQ9 567 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 UBL7Q96S82 380 aaPredicted RBP6.87□□□□□ -1.31
EPHA3-201ENST00000336596 TUBA1CQ9BQE3 449 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 AIG1Q9NVV5 245 aa6.87□□□□□ -1.31
EPHA3-201ENST00000336596 PLEK2Q9NYT0 353 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms