RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RARAP10276 462 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 HOXB9P17482 250 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 FMO3P31513 532 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR15P49685 360 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SMSP52788 366 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SEMG2Q02383 582 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DAG1Q14118 895 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GALNT10Q86SR1 603 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5M1Q8NGP8 315 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 MSI2Q96DH6 328 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 NACC1Q96RE7 527 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PSAT1Q9Y617 370 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PYCR1P32322 319 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACVR1BP36896 505 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MMP13P45452 471 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF136P52737 540 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 DUSP8Q13202 625 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HNRNPDQ14103 355 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MED27Q6P2C8 311 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 RABEPKQ7Z6M1 372 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GID4Q8IVV7 300 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CYP4X1Q8N118 509 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 NATD1Q8N6N6 113 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR10W1Q8NGF6 305 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 IL4I1Q96RQ9 567 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MGLLQ99685 303 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MKKSQ9NPJ1 570 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF331Q9NQX6 463 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PAK1IP1Q9NWT1 392 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASIC5Q9NY37 505 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 COA3Q9Y2R0 106 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SNX11Q9Y5W9 270 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MANSC4A6NHS7 340 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNASEK-C17orf49H0YIS7 233 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDIPTO14735 213 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 B4GALT2O60909 372 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLDN1O95832 211 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ALPLP05186 524 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 AOAHP28039 575 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CCL23P55773 120 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM62Q0P6H9 643 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 IRF4Q15306 451 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 RTP2Q5QGT7 225 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM78BQ5VT40 261 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM107Q6UX40 140 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CCDC190Q86UF4 302 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNG3Q8TAE7 436 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZFAND1Q8TCF1 268 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OSGEPQ9NPF4 335 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 KIF26BQ2KJY2 2108 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 VWDEQ8N2E2 1590 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 XKRY2A2RUG3 117 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC15A5A6NIM6 579 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ANHXE9PGG2 379 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRICKLE3O43900 615 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDC14BO60729 498 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ERAL1O75616 437 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FGF4P08620 206 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HOXC6P09630 235 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HLA-DOBP13765 273 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 NOGQ13253 232 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF776Q68DI1 518 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 RGP1Q92546 391 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MRPL38Q96DV4 380 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZMYND19Q96E35 227 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5M11Q96RB7 305 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ERVK-5Q9HDB9 667 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HSPB8Q9UJY1 196 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 LIPT1Q9Y234 373 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACOT9Q9Y305 439 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ABHD14A-ACY1A0A1B0GW23 586 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MEIOCA2RUB1 952 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM221AA4D161 298 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 C19orf67A6NJJ6 358 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 AQP7O14520 342 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CSTBP04080 98 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PFKLP17858 780 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HOXA9P31269 272 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM3BP58499 235 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FKBP1BP68106 108 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 RESP18Q5W5W9 173 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF584Q8IVC4 421 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF675Q8TD23 568 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM71F1Q96KD3 344 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SERTAD4Q9NUC0 356 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFSF13BQ9Y275 285 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLDN16Q9Y5I7 305 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 URGCP-MRPS24S4R325 110 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MED23Q9ULK4 1368 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PLPP1O14494 284 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 JUNBP17275 347 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 COMTP21964 271 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 AZGP1P25311 298 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF239Q16600 458 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SMUG1Q53HV7 270 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 CT83Q5H943 113 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF34Q8IZ26 560 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GSTCDQ8NEC7 633 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR4K5Q8NGD3 323 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms