RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FZD4Q9ULV1 537 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CD8B2A6NJW9 211 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 NPIPB9F8W1W9 429 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 TLR4O00206 839 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 ARPC1BO15143 372 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 FARS2O95363 451 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 IGFBP1P08833 259 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CD8BP10966 210 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF25P17030 456 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 PCSK1P29120 753 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 GABRA5P31644 462 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OR1G1P47890 313 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 TTPAP49638 278 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CRYBA2P53672 197 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 ADPRHP54922 357 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 FOXO1Q12778 655 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 SLC35D3Q5M8T2 416 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CEACAM20Q6UY09 585 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OAFQ86UD1 273 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 SIDT2Q8NBJ9 832 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OR52I1Q8NGK6 324 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OR51Q1Q8NH59 317 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 ZFP3Q96NJ6 502 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OPN4Q9UHM6 478 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 KIAA0100Q14667 2235 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 A0A1B0GUH1 482 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 A6NLC8 198 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 UGDHO60701 494 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 KCNK5O95279 499 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 HMBSP08397 361 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 UBBP0CG47 229 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 UBCP0CG48 685 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 AVPR2P30518 371 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 MPIP34949 423 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 IRS1P35568 1242 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 FLT3LGP49771 235 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 CRISP1P54107 249 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 OR2B8PP59922 312 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 RPS27AP62979 156 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 UBA52P62987 128 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 VEZF1Q14119 521 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PAPD4Q6PIY7 484 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF683Q8IZ20 524 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 OR5M1Q8NGP8 315 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF75AQ96N20 296 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TREM1Q9NP99 234 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 C19orf12Q9NSK7 152 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PTGESO14684 152 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 EREGO14944 169 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 FKTNO75072 461 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 OR8G3PP0DMU2 310 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 EPXP11678 715 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PRPS2P11908 318 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 BCKDHAP12694 445 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 HTR2AP28223 471 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 OR1E2P47887 323 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 SLC11A2P49281 568 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 CSNK1EP49674 416 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 F2RL1P55085 397 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 WNT4P56705 351 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 H2BFSP57053 126 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 RPS14P62263 151 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 GAB1Q13480 694 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TPBGQ13641 420 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 C2orf68Q2NKX9 166 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 GFOD2Q3B7J2 385 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TMEM31Q5JXX7 168 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 CTSL3PQ5NE16 218 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PTOV1Q86YD1 416 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TTC16Q8NEE8 873 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 OSTF1Q92882 214 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PSMG2Q969U7 264 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 SEMA3CQ99985 751 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 MAPKAP1Q9BPZ7 522 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 GINS4Q9BRT9 223 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 IFT27Q9BW83 186 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 CACYBPQ9HB71 228 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 CTPS2Q9NRF8 586 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 RPL36Q9Y3U8 105 aaKnown RBP11.05□□□□□ -0.64
SHMT2-201ENST00000328923 TRPV2Q9Y5S1 764 aa11.05□□□□□ -0.64
SHMT2-201ENST00000328923 PTPRDP23468 1912 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 hCG_1809904A0A1W2PP81 198 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 A0A1W2PR64 198 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 A0A1W2PRV1 198 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CARNS1A5YM72 827 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 KDM4EB2RXH2 506 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 J3KTA2 159 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SEPT4O43236 478 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 FMO6PO60774 539 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms