RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 LSRQ86X29 649 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 GID4Q8IVV7 300 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 CMTM4Q8IZR5 234 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 SLC44A3Q8N4M1 653 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 RASGEF1AQ8N9B8 481 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 OR10H4Q8NGA5 316 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 LGALS14Q8TCE9 139 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 UTP23Q9BRU9 249 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 HCAR1Q9BXC0 346 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PINK1Q9BXM7 581 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 NKX6-2Q9C056 277 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 FN3KQ9H479 309 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 SLC35C2Q9NQQ7 365 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 ACTR10Q9NZ32 417 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 COL4A3Q01955 1670 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 PIP5K1CO60331 668 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 GREM1O60565 184 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 AQP8O94778 261 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 IGF2P01344 180 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 TRHRP34981 398 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SCRN3Q0VDG4 424 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 LINC00303Q3SY05 128 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 HENMT1Q5T8I9 393 aaKnown RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 PRSS55Q6UWB4 352 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 APOOLQ6UXV4 268 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 MEPCEQ7L2J0 689 aaKnown RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 LINGO2Q7L985 606 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 FANK1Q8TC84 345 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 LINC01599Q8WXQ3 324 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SAMD8Q96LT4 415 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 MARCH5Q9NX47 278 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SLC39A1Q9NY26 324 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 MED11Q9P086 117 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 NDRG3Q9UGV2 375 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 OPN4Q9UHM6 478 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SNRPGP15A8MWD9 76 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 EOMESO95936 686 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 RLN2P04090 185 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 ATP1B1P05026 303 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 IL5P05113 134 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 CTSAP10619 480 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 BSGP35613 385 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 CTSOP43234 321 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 GCGRP47871 477 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 LMAN2Q12907 356 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 HFEQ30201 348 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 LRRTM4Q86VH4 590 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 OR8K3Q8NH51 312 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SUN3Q8TAQ9 357 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
CCDC60-201ENST00000327554 NDC1Q9BTX1 674 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 UBQLN3Q9H347 655 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 NTNG1Q9Y2I2 539 aa11.88□□□□□ -0.51
CCDC60-201ENST00000327554 A0A1W2PPK0 400 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF749O43361 778 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 REM1O75628 298 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 H2BFSP57053 126 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 LTB4RQ15722 352 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 KCNA10Q16322 511 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 CSRP2Q16527 193 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 C2orf68Q2NKX9 166 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF805Q5CZA5 627 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 UBE2NLQ5JXB2 153 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 MPP7Q5T2T1 576 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 OLFML2AQ68BL7 652 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 NRMQ8IXM6 262 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 RELL2Q8NC24 303 aaPredicted RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ACOT11Q8WXI4 607 aaPredicted RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 NSMAFQ92636 917 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 C4orf36Q96KX1 117 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 ARHGDIGQ99819 225 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 SEMA4CQ9C0C4 833 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 MRPL17Q9NRX2 175 aaKnown RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 MRTO4Q9UKD2 239 aaKnown RBP11.87□□□□□ -0.51
CCDC60-201ENST00000327554 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 H7C2Y5 167 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 CDC42EP2O14613 210 aa11.87□□□□□ -0.51
CCDC60-201ENST00000327554 PCDH8O95206 1070 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms