RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 CD59P13987 128 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 GPR4P46093 362 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 GABRA4P48169 554 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 CFHR1Q03591 330 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 DSG2Q14126 1118 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 PGGHGQ32M88 737 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 ZNF628Q5EBL2 1059 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 ZCCHC12Q6PEW1 402 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 OR8H2Q8N162 312 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 ZNF619Q8N2I2 560 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 CSNK1A1LQ8N752 337 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 ZNF285Q96NJ3 590 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 MED18Q9BUE0 208 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SLC7A7Q9UM01 511 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 CDH10Q9Y6N8 788 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 IGHV5-51A0A0C4DH38 117 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 KLF4O43474 513 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 DUX1O43812 170 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SRPX2O60687 465 aaPredicted RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 AK1P00568 194 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 EIF2S1P05198 315 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 CD1CP29017 333 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 VSX2P58304 361 aaPredicted RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 EEF1A1P68104 462 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 PSPHP78330 225 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 GPR68Q15743 365 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 CDRT4Q8N9R6 151 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 POGLUT1Q8NBL1 392 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 TMEM255BQ8WV15 326 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 PMM1Q92871 262 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 C1GALT1C1Q96EU7 318 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 TRMT61AQ96FX7 289 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
VRK3-201ENST00000316763 TXNDC15Q96J42 360 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SLC35F4A4IF30 521 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 CHST10O43529 356 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 APOL3O95236 402 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 ATP1B1P05026 303 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 IFI6P09912 130 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 NT5EP21589 574 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 GABRA5P31644 462 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 GRK6P43250 576 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 SLC9A3P48764 834 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 SQSTM1Q13501 440 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 NR0B2Q15466 257 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 PRTGQ2VWP7 1150 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 AADACL4Q5VUY2 407 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 C22orf42Q6IC83 251 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 WDR74Q6RFH5 385 aaPredicted RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 CCBE1Q6UXH8 406 aaPredicted RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 PLXDC1Q8IUK5 500 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 RNF113BQ8IZP6 322 aaKnown RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 OR4Q3Q8NH05 313 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 AP3S1Q92572 193 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 CCDC74AQ96AQ1 378 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 STACQ99469 402 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 DUSP22Q9NRW4 184 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 ERVK13-1Q9NX77 482 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 CAB39Q9Y376 341 aaPredicted RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
VRK3-201ENST00000316763 ASXL3Q9C0F0 2248 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 RP1P56715 2156 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 SCN2AQ99250 2005 aa13.12□□□□□ -0.31
VRK3-201ENST00000316763 FLRT2O43155 660 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 PLOD3O60568 738 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 KCNK2O95069 426 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 GPR75O95800 540 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CH25HO95992 272 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 HTR1FP30939 366 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CSF2RBP32927 897 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 ATP6V1E1P36543 226 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms