RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 RAET1LQ5VY80 246 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 ZNF836Q6ZNA1 936 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 CD163Q86VB7 1156 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 PTOV1Q86YD1 416 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 IQCF2Q8IXL9 164 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 ZZZ3Q8IYH5 903 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 FITM2Q8N6M3 262 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 PCYOX1LQ8NBM8 494 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 OR52P1PQ8NH57 321 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 B4GALNT2Q8NHY0 566 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 FBXO27Q8NI29 283 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 NEIL3Q8TAT5 605 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 BCAS4Q8TDM0 211 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 WDR60Q8WVS4 1066 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 CNOT9Q92600 299 aaKnown RBP7.13□□□□□ -1.27
CDC42-201ENST00000315554 ZNF524Q96C55 264 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 C1GALT1C1Q96EU7 318 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 DMRTB1Q96MA1 342 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 SFXN2Q96NB2 322 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 LRRC37BQ96QE4 947 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 TREX2Q9BQ50 279 aaPredicted RBP7.13□□□□□ -1.27
CDC42-201ENST00000315554 OR2B2Q9GZK3 357 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 PNPLA3Q9NST1 481 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 MRGBPQ9NV56 204 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 GID8Q9NWU2 228 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 ALKBH4Q9NXW9 302 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 PACSIN3Q9UKS6 424 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 GTF2A1LQ9UNN4 478 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 L3MBTL1Q9Y468 752 aa7.13□□□□□ -1.27
CDC42-201ENST00000315554 RP1L1Q8IWN7 2480 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 IGLV3-32A0A0A0MS00 114 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 AGAP5A6NIR3 686 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZNF264O43296 627 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 FRS3O43559 492 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZIC3O60481 467 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 SEMA7AO75326 666 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 PGM3O95394 542 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CSTAP01040 98 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 OPN1SWP03999 348 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 BMP2P12643 396 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 BMP7P18075 431 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 SLC6A2P23975 617 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 MAGEA8P43361 318 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 DSCR4P56555 118 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 B3GALT5-AS1P59052 145 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 KCNJ10P78508 379 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 SRYQ05066 204 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 RBPJQ06330 500 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ART3Q13508 389 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 FGFBP1Q14512 234 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZNF630Q2M218 657 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 ALKBH2Q6NS38 261 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZNF585AQ6P3V2 769 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ARHGAP11AQ6P4F7 1023 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CFAP161Q6P656 301 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 PLXDC2Q6UX71 529 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 BNC2Q6ZN30 1099 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 EIF3MQ7L2H7 374 aaKnown RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 FJX1Q86VR8 437 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 IFNEQ86WN2 208 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 PEX5LQ8IYB4 626 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 Q8N3U1 123 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 RPRMLQ8N4K4 120 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ANKS4BQ8N8V4 417 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 BBS10Q8TAM1 723 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 GIMAP1Q8WWP7 306 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 SMPDL3BQ92485 455 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CMTM5Q96DZ9 223 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 UGT2B28Q9BY64 529 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 KAT8Q9H7Z6 458 aaKnown RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 PTGES2Q9H7Z7 377 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 MTHFD2LQ9H903 347 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 EFCAB1Q9HAE3 211 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ACKR4Q9NPB9 350 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 POLE3Q9NRF9 147 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 MED17Q9NVC6 651 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 RLIMQ9NVW2 624 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CMTM6Q9NX76 183 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 THUMPD1Q9NXG2 353 aaKnown RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 QPCTLQ9NXS2 382 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CALML5Q9NZT1 146 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CORO2BQ9UQ03 480 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 CAMK2AQ9UQM7 478 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZNF443Q9Y2A4 671 aaPredicted RBP7.12□□□□□ -1.27
CDC42-201ENST00000315554 DSPPQ9NZW4 1301 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 ZNF407Q9C0G0 2248 aa7.12□□□□□ -1.27
CDC42-201ENST00000315554 MED12Q93074 2177 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 A0A0G2JPF8 293 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 A0A1B0GVC2 190 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 OR2M5A3KFT3 312 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 KDM4EB2RXH2 506 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 HNRNPCL2B2RXH8 293 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HNRNPCL3B7ZW38 293 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 H3BML4 177 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 AQP7O14520 342 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 AP3D1O14617 1153 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms