RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 APOL2Q9BQE5 337 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 PTDSS2Q9BVG9 487 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 PPIL3Q9H2H8 161 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TMEM100Q9NV29 134 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 GPATCH2LQ9NWQ4 482 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 GPN3Q9UHW5 284 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SAMD4AQ9UPU9 718 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 HSPB11Q9Y547 144 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 COL12A1Q99715 3063 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 GOLGA4Q13439 2230 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 IGHV1OR21-1A0A087WYE8 117 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TMEM129A0AVI4 362 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MEX3AA1L020 520 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF729A6NN14 1252 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 I3L521 148 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MAFKO60675 156 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MT-ND1P03886 318 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TYRP1P17643 537 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 AHCYP23526 432 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TGM4P49221 684 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 CENPAP49450 140 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SESN2P58004 480 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SNRPD2P62316 118 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ALDH6A1Q02252 535 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 HSF2Q03933 536 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 BTN1A1Q13410 526 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 GPR176Q14439 515 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ZMYND11Q15326 602 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FCN2Q15485 313 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SYT16Q17RD7 645 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 EIF2S3LQ2VIR3 472 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF667Q5HYK9 610 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C5orf46Q6UWT4 87 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C6orf15Q6UXA7 325 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C12orf29Q8N999 325 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 OR5M9Q8NGP3 310 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 RNF139Q8WU17 664 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 EXOC2Q96KP1 924 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 NSUN5Q96P11 429 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SEPHS2Q99611 448 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 NT5C1AQ9BXI3 368 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MS4A7Q9GZW8 240 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C1orf109Q9NX04 203 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TRDV1A0A1B0GX56 115 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM74A7A6NL05 159 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM72CH0Y354 149 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ARHGEF9O43307 516 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 LDB2O43679 373 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MPZL2O60487 215 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TPST1O60507 370 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 RDH16O75452 317 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 STK17BO94768 372 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TNFP01375 233 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MELTFP08582 738 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 CCL4P13236 92 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 CD19P15391 556 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MMP12P39900 470 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 CTSOP43234 321 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TDGF1P3P51864 188 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 NUDT6P53370 316 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 PSMD4P55036 377 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 RRADP55042 308 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 CDH4P55283 916 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MTPNP58546 118 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 EFEMP1Q12805 493 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 KLF9Q13886 244 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 BOP1Q14137 746 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 QPRTQ15274 297 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM74A3Q4VXF1 159 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM72AQ5TYM5 149 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 RNF219Q5W0B1 726 aaPredicted RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM72DQ6L9T8 149 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 NLRC3Q7RTR2 1065 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 FAM72BQ86X60 149 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SKA3Q8IX90 412 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 L3MBTL4Q8NA19 623 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 ELP5Q8TE02 316 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SCARB1Q8WTV0 552 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SNRNP40Q96DI7 357 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MTFMTQ96DP5 389 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TSPAN17Q96FV3 270 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C10orf90Q96M02 699 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TRIB3Q96RU7 358 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TBL1YQ9BQ87 522 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 YIPF4Q9BSR8 244 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 MED10Q9BTT4 135 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SPATA5L1Q9BVQ7 753 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 REPIN1Q9BWE0 567 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 RASSF1Q9NS23 344 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 DDX28Q9NUL7 540 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 GPR83Q9NYM4 423 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SLC2A6Q9UGQ3 507 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 TSPAN16Q9UKR8 245 aa3.87□□□□□ -1.79
POLR2B-201ENST00000314595 SPTAN1Q13813 2472 aaKnown RBP3.87□□□□□ -1.79
POLR2B-201ENST00000314595 LOC390937A0A1W2PQ73 354 aa3.86□□□□□ -1.79
POLR2B-201ENST00000314595 DRGXA6NNA5 263 aa3.86□□□□□ -1.79
POLR2B-201ENST00000314595 E5RI56 91 aa3.86□□□□□ -1.79
POLR2B-201ENST00000314595 LANCL1O43813 399 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms