RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 KLHL21Q9UJP4 597 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 ECDO95905 644 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 ERVK-25P63136 954 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 E2F2Q14209 437 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 RBM45Q8IUH3 476 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 JAGN1Q8N5M9 183 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 ZMYND19Q96E35 227 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 OR5B2Q96R09 309 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 FAM183AA6NL82 134 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 IDSB3KWA1 339 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 OPN1LWP04000 364 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 IFNA6P05013 189 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 YOD1Q5VVQ6 348 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 B3GNT7Q8NFL0 401 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 OR7G1Q8NGA0 311 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 WDR34Q96EX3 536 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 LHPPQ9H008 270 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 S1PR5Q9H228 398 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 A0A1B0GWA3 101 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 DHFRP00374 187 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 TCN2P20062 427 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 S1PR1P21453 382 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 CXCR4P61073 352 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 PLAG1Q6DJT9 500 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 C1orf94Q6P1W5 598 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 LRFN4Q6PJG9 635 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 CNOT9Q92600 299 aaKnown RBP12.71□□□□□ -0.37
DDX54-202ENST00000314045 MVB12AQ96EY5 273 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 STACQ99469 402 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 THSD1Q9NS62 852 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 UBE2QL1A1L167 161 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 SNPHO15079 494 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 ANKRD28O15084 1053 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 IDH3BO43837 385 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 FCMRO60667 390 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 WISP3O95389 354 aaPredicted RBP12.71□□□□□ -0.37
DDX54-202ENST00000314045 UTS2O95399 124 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 RLN1P04808 185 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 H2BFMP0C1H6 154 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 GPR3P46089 330 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 SPARTQ8N0X7 666 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 SDR9C7Q8NEX9 313 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 TTYH2Q9BSA4 534 aa12.71□□□□□ -0.37
DDX54-202ENST00000314045 PAK1IP1Q9NWT1 392 aaPredicted RBP12.71□□□□□ -0.37
DDX54-202ENST00000314045 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 A0A1B0GVI7 797 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 H0YIG0 161 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 ICAM2P13598 275 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 CRHBPP24387 322 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 ZNF84P51523 738 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 NXPH1P58417 271 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 PGGHGQ32M88 737 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 KLHL26Q53HC5 615 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 PTOV1Q86YD1 416 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 CSF3RQ99062 836 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 WDR77Q9BQA1 342 aaPredicted RBP12.71□□□□□ -0.38
DDX54-202ENST00000314045 HDHD5Q9BXW7 423 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 EGLN3Q9H6Z9 239 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 DIABLOQ9NR28 239 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 SACM1LQ9NTJ5 587 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 KLF15Q9UIH9 416 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 SPATA2Q9UM82 520 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 FKBP7Q9Y680 259 aa12.71□□□□□ -0.38
DDX54-202ENST00000314045 MYO16Q9Y6X6 1858 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 A0A0A6YYD5 115 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 UPK1AO00322 258 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 PLOD2O00469 737 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 SSNA1O43805 119 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 NUDT21O43809 227 aaKnown RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 TSC22D2O75157 780 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 CYB5AP00167 134 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 MAPK3P27361 379 aaPredicted RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 TMEM71Q6P5X7 295 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 ZNF793Q6ZN11 406 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 ATG14Q6ZNE5 492 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 CEACAM19Q7Z692 300 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 RNF113BQ8IZP6 322 aaKnown RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 PMM1Q92871 262 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 SLC6A13Q9NSD5 602 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 FLRT2O43155 660 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 CCNOP22674 350 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 C21orf33P30042 268 aaPredicted RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 HNRNPA0Q13151 305 aaKnown RBP12.7□□□□□ -0.38
DDX54-202ENST00000314045 C22orf42Q6IC83 251 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 RNF165Q6ZSG1 346 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 ZER1Q7Z7L7 766 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 UEVLDQ8IX04 471 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 RIMKLAQ8IXN7 391 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms