RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CBFBQ13951 182 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 GRB7Q14451 532 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 LETMD1Q6P1Q0 360 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CLEC4CQ8WTT0 213 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TOX2Q96NM4 488 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 INTS14Q96SY0 518 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 DUSP22Q9NRW4 184 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 A0A1B0GUH1 482 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 GAAP10253 952 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 PRKCAP17252 672 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 AMY2BP19961 511 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 GDI2P50395 445 aaKnown RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 PGGHGQ32M88 737 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 KCNIP4Q6PIL6 250 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 DPY19L2P2Q6ZN68 376 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TRILQ7L0X0 811 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ACBD4Q8NC06 268 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR5L1Q8NGL2 311 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR14C36Q8NHC7 312 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SHISA4Q96DD7 197 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM19Q96HH6 336 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TREX2Q9BQ50 279 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SPACA1Q9HBV2 294 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 PLXNA2O75051 1894 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ATP6V1G2-DDX39BF2Z307 99 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TGFB1P01137 390 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CD79BP40259 229 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 FAPQ12884 760 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TM9SF4Q92544 642 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR51B5Q9H339 312 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 MAP10Q9P2G4 905 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 METTL15A6NJ78 407 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ICAM2P13598 275 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF43P17038 809 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 GPR68Q15743 365 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 BTN2A1Q7KYR7 527 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 HDAC8Q9BY41 377 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 GSX2Q9BZM3 304 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 NYNRINQ9P2P1 1898 aaKnown RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TAC3Q9UHF0 121 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SPTBN2O15020 2390 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CPED1A4D0V7 1026 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 GLAP06280 429 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 BPIP17213 487 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 NFYBP25208 207 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 MSX1P28360 303 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SHC2P98077 582 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CES4AQ5XG92 561 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 FBXL6Q8N531 539 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OR51G2Q8NGK0 314 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 NXPE3Q969Y0 559 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 A8MXE2 369 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ADORA3P0DMS8 318 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 COL9A3Q14050 684 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 P2RY14Q15391 338 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 GALNT11Q8NCW6 608 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TEPSINQ96N21 525 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CASD1Q96PB1 797 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OSGIN1Q9UJX0 560 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 NXT1Q9UKK6 140 aaKnown RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 MMACHCQ9Y4U1 282 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TNS1Q9HBL0 1735 aaKnown RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TO15178 435 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 PCCBP05166 539 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 LPLP06858 475 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 POU2F1P14859 743 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 PYCR1P32322 319 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ARRB1P49407 418 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 EGR3Q06889 387 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 DPTQ07507 201 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SPOCK1Q08629 439 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CLEC12AQ5QGZ9 265 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 B3GNT8Q7Z7M8 397 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 GOLGA2P5Q9HBQ8 144 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 IL26Q9NPH9 171 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 CBLCQ9ULV8 474 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SLC22A23A1A5C7 686 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TLE4Q04727 773 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OSTM1Q86WC4 334 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SLC5A8Q8N695 610 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OR14A16Q8NHC5 309 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 MFSD8Q8NHS3 518 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 MARVELD3Q96A59 401 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ALOXE3Q9BYJ1 711 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SLC23A1Q9UHI7 598 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 RGS13O14921 159 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 COCHO43405 550 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SLC22A5O76082 557 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 PRKACBP22694 351 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 RABGGTBP53611 331 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 C6orf183Q5T699 404 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms