RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 TUBAL3A6NHL2 446 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 GTPBP1O00178 669 aaKnown RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 ZNF195O14628 629 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 KLF11O14901 512 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 CXCL13O43927 109 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 STX11O75558 287 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 CTAG2O75638 210 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 SOX30O94993 753 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 AK1P00568 194 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 GSNP06396 782 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 PGRP06401 933 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 UBL4AP11441 157 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 PEX19P40855 299 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 KIR2DL2P43627 348 aaPredicted RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 SUMO3P55854 103 aaPredicted RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 SORDQ00796 357 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 DNAJC14Q6Y2X3 702 aaPredicted RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 BTLAQ7Z6A9 289 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 HMGN2P46Q86SG4 172 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 KIF18BQ86Y91 864 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 OR10D3Q8NH80 312 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 FBXO27Q8NI29 283 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 PIWIL2Q8TC59 973 aaKnown RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 FAM222BQ8WU58 562 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 XAGE5Q8WWM1 108 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 STARD4Q96DR4 205 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 OR52E6Q96RD3 313 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 NMUR2Q9GZQ4 415 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 OPN3Q9H1Y3 402 aaPredicted RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 EXD2Q9NVH0 621 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 DNAJB12Q9NXW2 375 aaKnown RBP14.64□□□□□ -0.07
LSM1-201ENST00000311351 CLEC4AQ9UMR7 237 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 F8P00451 2351 aa14.64□□□□□ -0.07
LSM1-201ENST00000311351 A0A0J9YW62 118 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 PRAMEF27A3QJZ7 478 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 A6NNC1 897 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 A8MXE2 369 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 ZNF264O43296 627 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 KIAA0513O60268 411 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 DIAPH2O60879 1101 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 UGT2B17O75795 530 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 CYP7B1O75881 506 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 CRHP06850 196 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 IDO1P14902 403 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 PRKCAP17252 672 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 ME2P23368 584 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 SFTPDP35247 375 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 RAC1P63000 192 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 ZNF141Q15928 474 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 MAPK14Q16539 360 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 PDCD4Q53EL6 469 aaKnown RBP14.63□□□□□ -0.07
LSM1-201ENST00000311351 ATAD3BQ5T9A4 648 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 TYW3Q6IPR3 259 aaKnown RBP14.63□□□□□ -0.07
LSM1-201ENST00000311351 RNF130Q86XS8 419 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 OR9I1Q8NGQ6 314 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 OR2V1Q8NHB1 315 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 PNPT1Q8TCS8 783 aaKnown RBP14.63□□□□□ -0.07
LSM1-201ENST00000311351 GPR119Q8TDV5 335 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 ROPN1LQ96C74 230 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 KLHL15Q96M94 604 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 PANX1Q96RD7 426 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 ZBTB18Q99592 522 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 SLCO1B3Q9NPD5 702 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 STOML1Q9UBI4 398 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 USH1CQ9Y6N9 552 aa14.63□□□□□ -0.07
LSM1-201ENST00000311351 CCDC154A6NI56 674 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 EFNA2O43921 213 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 BCAS1O75363 584 aaPredicted RBP14.62□□□□□ -0.07
LSM1-201ENST00000311351 FCGR2AP12318 317 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 ELK4P28324 431 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 SKP2Q13309 424 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 GUSBP1Q15486 140 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 HBMQ6B0K9 141 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 FRRS1Q6ZNA5 592 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 ESPNLQ6ZVH7 1005 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 LILRA2Q8N149 483 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 OR5W2Q8NH69 310 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 POLDIP3Q9BY77 421 aaKnown RBP14.62□□□□□ -0.07
LSM1-201ENST00000311351 PRRG4Q9BZD6 226 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 CLEC4MQ9H2X3 399 aaPredicted RBP14.62□□□□□ -0.07
LSM1-201ENST00000311351 RASSF1Q9NS23 344 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 SLC6A13Q9NSD5 602 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 WDR45Q9Y484 360 aa14.62□□□□□ -0.07
LSM1-201ENST00000311351 FAM221AA4D161 298 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 HMGN4O00479 90 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 MSTNO14793 375 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 ADAMDEC1O15204 470 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 EIF4E2O60573 245 aaKnown RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 SLC22A3O75751 556 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 AGR2O95994 175 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 CSTAP01040 98 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 UBTFL6P0CB48 400 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 CCKARP32238 428 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 EIF1P41567 113 aaKnown RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 EEF1A1P68104 462 aaKnown RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 QPRTQ15274 297 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 TIGD2Q4W5G0 525 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 GPAT3Q53EU6 434 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 COX20Q5RI15 118 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms