RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 HCFC1R1Q9NWW0 138 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 ATG4BQ9Y4P1 393 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SPTBN2O15020 2390 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 RPS10-NUDT3A0A1W2PQS6 291 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 hCG_1807616A0A1W2PRN6 198 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 CDHR4A6H8M9 788 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 EMC8O43402 210 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 TBX6O95947 436 aaPredicted RBP10.38□□□□□ -0.75
PTPN7-201ENST00000309017 IFNA16P05015 189 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 TCEA2Q15560 299 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 HACD4Q5VWC8 232 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 TMEM215Q68D42 235 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 C18orf63Q68DL7 685 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 MBOAT2Q6ZWT7 520 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 ZNF547Q8IVP9 402 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 OR2L2Q8NH16 312 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 NR4A3Q92570 626 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 HCAR1Q9BXC0 346 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 KLHL31Q9H511 634 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 TM7SF3Q9NS93 570 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SDHAF2Q9NX18 166 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 RNF186Q9NXI6 227 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 RWDD3Q9Y3V2 267 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SPEGQ15772 3267 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SLC22A31A6NKX4 558 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 PCCBP05166 539 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 GKN3PP0CG01 181 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 LAMP2P13473 410 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 PDX1P52945 283 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 TAS2R43P59537 309 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 KIAA1024LP59773 190 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 ACSM1Q08AH1 577 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 CAMK1Q14012 370 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 LTB4RQ15722 352 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 DECR1Q16698 335 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 HES5Q5TA89 166 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 C11orf88Q6PI97 169 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 MTSS1LQ765P7 747 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 NRSN1Q8IZ57 195 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 LGALS14Q8TCE9 139 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SNX33Q8WV41 574 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 RHBGQ9H310 441 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SAGE1Q9NXZ1 904 aa10.38□□□□□ -0.75
PTPN7-201ENST00000309017 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 FXYD6-FXYD2A0A087WZ82 144 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 SYT5O00445 386 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ARL6IP5O75915 188 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 KDM4BO94953 1096 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ANKRD34CP0C6C1 535 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CLUP10909 449 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ATF1P18846 271 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CERS1P27544 350 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 TEAD1P28347 426 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 SREBF2Q12772 1141 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 TRAM1Q15629 374 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 RANBP3LQ86VV4 465 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ST8SIA4Q92187 359 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CNRIP1Q96F85 164 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 C1QTNF2Q9BXJ5 285 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 PCBD2Q9H0N5 130 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 FXYD6Q9H0Q3 95 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 NANSQ9NR45 359 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 LYARQ9NX58 379 aaKnown RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CXXC1Q9P0U4 656 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 FKBP7Q9Y680 259 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ANTXRLA6NF34 631 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 SCAMP1O15126 338 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ARPC5O15511 151 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 TGM5O43548 720 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 LATO43561 262 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 RLN1P04808 185 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 PRKACAP17612 351 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CAP1Q01518 475 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 BDH1Q02338 343 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 OC90Q02509 493 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 CCNJQ5T5M9 372 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ZNF793Q6ZN11 406 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 FAM98AQ8NCA5 519 aaKnown RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 C1orf216Q8TAB5 229 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 GRHL3Q8TE85 626 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 SMPDL3BQ92485 455 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 HGDQ93099 445 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 PAWRQ96IZ0 340 aaKnown RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 LINC00052Q96N35 136 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 AKAP7Q9P0M2 348 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-201ENST00000309017 TBX19O60806 448 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 ACADLP28330 430 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 THBS2P35442 1172 aa10.37□□□□□ -0.75
PTPN7-201ENST00000309017 GBX2P52951 348 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms