RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 C2orf74A8MZ97 194 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 CASKO14936 926 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 POLR1CO15160 346 aaPredicted RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 TMCC2O75069 709 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 RCBTB2O95199 551 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 GPR75O95800 540 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 KRT8P05787 483 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 HTR3AP46098 478 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 TGM4P49221 684 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 RNF144AP50876 292 aaPredicted RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF155Q12901 538 aaPredicted RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 CARTPTQ16568 116 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 MZT2AQ6P582 158 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF517Q6ZMY9 492 aaPredicted RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 PIGKQ92643 395 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 HS6ST2Q96MM7 605 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
RAB40A-201ENST00000304236 CTRCQ99895 268 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF649Q9BS31 505 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
RAB40A-201ENST00000304236 A0A1W2PQ09 198 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 H0YGG7 62 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 NTN1O95631 604 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 TRAPPC2P0DI81 140 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 TRAPPC2BP0DI82 140 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 NT5EP21589 574 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 AKT2P31751 481 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 RFX2P48378 723 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 ARF3P61204 181 aaPredicted RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 ILF3Q12906 894 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 GPR18Q14330 331 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 OR1Q1Q15612 314 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF322Q6U7Q0 402 aaPredicted RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 CPOQ8IVL8 374 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 BAHD1Q8TBE0 780 aaPredicted RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 RERGLQ9H628 205 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 IL21RQ9HBE5 538 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 HINT3Q9NQE9 182 aaKnown RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 SIDT1Q9NXL6 827 aaKnown RBP13.15□□□□□ -0.3
RAB40A-201ENST00000304236 ADAM30Q9UKF2 790 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 DNAH14Q0VDD8 3507 aa13.15□□□□□ -0.3
RAB40A-201ENST00000304236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 LNP1A1A4G5 178 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 HTR3EA5X5Y0 456 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 H0Y8X5 98 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 J3QRE1 110 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 SSX4O60224 188 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 HCN1O60741 890 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 AZGP1P25311 298 aaKnown RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 SOX18P35713 384 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 MEPCEQ7L2J0 689 aaKnown RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 MARCH9Q86YJ5 346 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 TMEFF1Q8IYR6 380 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 DNAJA4Q8WW22 397 aaPredicted RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 MRGPRX1Q96LB2 322 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 LOC102723532A0A0G2JNH3 316 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 A0A0J9YY10 115 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 OR5K4A6NMS3 321 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 GABRPO00591 440 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 LALBAP00709 142 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 TNFP01375 233 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 GUSBP08236 651 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CSF3P09919 207 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 IFI30P13284 250 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CELP19835 753 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 HTR2AP28223 471 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CD79BP40259 229 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 SNRPNP63162 240 aaKnown RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
RAB40A-201ENST00000304236 TCEA2Q15560 299 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 MAPK14Q16539 360 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 ALG11Q2TAA5 492 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 PYDC2Q56P42 97 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 CCNJQ5T5M9 372 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 ZNF613Q6PF04 617 aa13.14□□□□□ -0.31
RAB40A-201ENST00000304236 KIAA1324Q6UXG2 1013 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms