RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 SLC6A19Q695T7 634 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 ASB18Q6ZVZ8 466 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.63□□□□□ -1.03
RFX3-201ENST00000302303 PLCZ1Q86YW0 608 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 ZADH2Q8N4Q0 377 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 GPR119Q8TDV5 335 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 SLC35B4Q969S0 331 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 SH3YL1Q96HL8 342 aaPredicted RBP8.63□□□□□ -1.03
RFX3-201ENST00000302303 TPD52L3Q96J77 140 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 FAM173AQ9BQD7 235 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■■□ 21.8
RFX3-201ENST00000302303 DSN1Q9H410 356 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 NDUFAF4Q9P032 175 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 SLC35A3Q9Y2D2 325 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 V9GYQ6 96 aa8.63□□□□□ -1.03
RFX3-201ENST00000302303 TRAV17A0A0B4J275 112 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 H3BNX3 289 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 J3KTA2 159 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 HAX1O00165 279 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 FAAHO00519 579 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 HCRTR2O43614 444 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 EFNA2O43921 213 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 ENTPD5O75356 428 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 IFNA14P01570 189 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 LINGO3P0C6S8 592 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 HPGDP15428 266 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 CD46P15529 392 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 PSMA4P25789 261 aaKnown RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 RFC3P40938 356 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 MEOX1P50221 254 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 P2RX1P51575 399 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 PMP22Q01453 160 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 ZNF169Q14929 603 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 RPUSD3Q6P087 351 aaKnown RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 ARSKQ6UWY0 536 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 CARM1Q86X55 608 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 MISPQ8IVT2 679 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 LSMEM1Q8N8F7 131 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 OR5W2Q8NH69 310 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 B4GALNT2Q8NHY0 566 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 C9orf43Q8TAL5 461 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 POC1BQ8TC44 478 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 SLC26A7Q8TE54 656 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 RASSF5Q8WWW0 418 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 RNF145Q96MT1 663 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 RAB3IPQ96QF0 476 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 IL1RAPQ9NPH3 570 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 CCM2LQ9NUG4 571 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 ADPRHL2Q9NX46 363 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 RPS6KA6Q9UK32 745 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 ACAD8Q9UKU7 415 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 BAG5Q9UL15 447 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 A4GNTQ9UNA3 340 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 SAMD4AQ9UPU9 718 aaKnown RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 B3GNT3Q9Y2A9 372 aa8.62□□□□□ -1.03
RFX3-201ENST00000302303 KLF13Q9Y2Y9 288 aaPredicted RBP8.62□□□□□ -1.03
RFX3-201ENST00000302303 ANKUB1A6NFN9 424 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 GTPBP1O00178 669 aaKnown RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 GMFGO60234 142 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 CELA3AP09093 270 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 UMPSP11172 480 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 MSX1P28360 303 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 B3GALT5-AS1P59052 145 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 RPP38P78345 283 aaKnown RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 LY6DQ14210 128 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 ZSWIM7Q19AV6 140 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 IFI44LQ53G44 452 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 SLC25A53Q5H9E4 307 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 PIWIL3Q7Z3Z3 882 aaKnown RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 ZNF605Q86T29 641 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 SPATA24Q86W54 205 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 SIAH3Q8IW03 269 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 TMEM251Q8N6I4 163 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 TOR1AIP2Q8NFQ8 470 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 OR1J4Q8NGS1 313 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 VANGL1Q8TAA9 524 aaPredicted RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 TM9SF4Q92544 642 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 C1GALT1C1Q96EU7 318 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 SEPHS2Q99611 448 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 TTTY12Q9BZ98 90 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 MAGIXQ9H6Y5 334 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 ZNF703Q9H7S9 590 aaPredicted RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 PPP4R1LQ9P1A2 415 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 C15orf41Q9Y2V0 281 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 MRPS18CQ9Y3D5 142 aaKnown RBP8.61□□□□□ -1.03
RFX3-201ENST00000302303 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
RFX3-201ENST00000302303 DHRS12A0PJE2 317 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 H3BNH8 94 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 KLRC4-KLRK1H3BQV0 150 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 hCG_2039718K7EN88 272 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 ERVH48-1M5A8F1 160 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 DPM1O60762 260 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 GMNNO75496 209 aa8.6□□□□□ -1.03
RFX3-201ENST00000302303 CBR3O75828 277 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms