RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 NUDT19A8MXV4 375 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MYF6P23409 242 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 PDGFRLQ15198 375 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 TOMM40LQ969M1 308 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM131CQ96AQ9 280 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 GPA33Q99795 319 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 METTL7AQ9H8H3 244 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 AKTIPQ9H8T0 292 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SIAEQ9HAT2 523 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MST1RQ04912 1400 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 M0R3H8 397 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 GABRA4P48169 554 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF92Q03936 586 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 PCBP1Q15365 356 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 BAK1Q16611 211 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 KCTD11Q693B1 232 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 PIGMQ9H3S5 423 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SARDHQ9UL12 918 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 POU3F4P49335 361 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 KIAA0907Q7Z7F0 614 aaPredicted RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SERPINA11Q86U17 422 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 RAB3CQ96E17 227 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 TCAF1Q9Y4C2 921 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SHMT2P34897 504 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 NOX3Q9HBY0 568 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 PIWIL3Q7Z3Z3 882 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 CCNL2Q96S94 520 aaPredicted RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 APEHP13798 732 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MGAT3Q09327 533 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF239Q16600 458 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 VASNQ6EMK4 673 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM225Q6GV28 225 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 APOOLQ6UXV4 268 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 FBXW12Q6X9E4 464 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 YIPF5Q969M3 257 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MRPL13Q9BYD1 178 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZDHHC4Q9NPG8 344 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 B3GNT3Q9Y2A9 372 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 OR6C68A6NDL8 312 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 GSK3BP49841 420 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 APOFQ13790 326 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 EPGNQ6UW88 154 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 ZBTB8AQ96BR9 441 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 TRMT2BQ96GJ1 504 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 UROC1Q96N76 676 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 CRTAC1Q9NQ79 661 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 STXBP5LQ9Y2K9 1186 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 A0A1B0GV72 72 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 SORBS2O94875 1100 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 HPNP05981 417 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 MMP7P09237 267 aaPredicted RBP10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 GSK3AP49840 483 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 KCNAB2Q13303 367 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 CATSPERGQ6ZRH7 1159 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 OR14L1PQ8NHC6 308 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM74Q96NL1 305 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 CASD1Q96PB1 797 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 RAB11FIP5Q9BXF6 653 aa10.58□□□□□ -0.72
HDGFL3-201ENST00000299633 OMGP23515 440 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 RPS13P62277 151 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 BAXQ07812 192 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PLPPR4Q7Z2D5 763 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 VAPAQ9P0L0 249 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TP53P04637 393 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF630Q2M218 657 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SHEQ5VZ18 495 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PRSS58Q8IYP2 241 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ACBD7Q8N6N7 88 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 C1orf198Q9H425 327 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SLIT2O94813 1529 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 LRCH4O75427 683 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SLURP2P0DP57 97 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 KDELR2P33947 212 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 RPS27LQ71UM5 84 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 WDR20Q8TBZ3 569 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC12A9Q9BXP2 914 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TP53I11O14683 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SERPINA5P05154 406 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TMUB2Q71RG4 321 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PRSS48Q7RTY5 328 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CMTM3Q96MX0 182 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 MGLLQ99685 303 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ZDHHC2Q9UIJ5 367 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ENPP3O14638 875 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 HAGHQ16775 308 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TEX26Q8N6G2 289 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PPTC7Q8NI37 304 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 MSLNLQ96KJ4 702 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms