RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PRAMEF8Q5VWM4 474 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 PRAMEF7Q5VXH5 474 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 FAM205BPQ63HN1 556 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 SSX6Q7RTT6 188 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 ASPGQ86U10 573 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 GJD3Q8N144 294 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 TMEM52Q8NDY8 209 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 OR4K14Q8NGD5 310 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 TMEM239Q8WW34 195 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 KISS1RQ969F8 398 aaPredicted RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 MARVELD1Q9BSK0 173 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 ZNF624Q9P2J8 865 aaPredicted RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 PVRP15151 417 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 RRAS2P62070 204 aaPredicted RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 EEF1A1P68104 462 aaKnown RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 SRFBP1Q8NEF9 429 aaKnown RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 OR52L1Q8NGH7 329 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 ZFAND1Q8TCF1 268 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 TIMM29Q9BSF4 260 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 C1QTNF2Q9BXJ5 285 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 CACYBPQ9HB71 228 aaKnown RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 ASB6Q9NWX5 421 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 POLHQ9Y253 713 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 BHLHE40O14503 412 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 LAMTOR1Q6IAA8 161 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 SFTPA2Q8IWL1 248 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 TCTE3Q8IZS6 198 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 ORAI1Q96D31 301 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 HS6ST2Q96MM7 605 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 PTCHD1Q96NR3 888 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 APOOQ9BUR5 198 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 RSPH9Q9H1X1 276 aaPredicted RBP22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 STARD5Q9NSY2 213 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 WSB2Q9NYS7 404 aaPredicted RBP22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 ZMIZ1Q9ULJ6 1067 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 DUXAA6NLW8 204 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 ORC5O43913 435 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 CD3GP09693 182 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 PPP2CBP62714 309 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 PPP2CAP67775 309 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 FOXK2Q01167 660 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 OR5H6Q8NGV6 325 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 OR5J2Q8NH18 312 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 PEX11GQ96HA9 241 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 RPP25Q9BUL9 199 aaKnown RBP22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 KCMF1Q9P0J7 381 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC17A4Q9Y2C5 497 aa22.62■■□□□ 1.21
SPTSSA-201ENST00000298130 A0A0A6YYJ9 748 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 GXYLT2A0PJZ3 443 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 OR2B3O76000 313 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ALX3O95076 343 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 PPP1R3DO95685 299 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 NT5EP21589 574 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 TNFRSF17Q02223 184 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 CRMP1Q14194 572 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 FCN2Q15485 313 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 CEBPEQ15744 281 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ENPP7Q6UWV6 458 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 PAQR7Q86WK9 346 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 OR4D9Q8NGE8 314 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ZFP3Q96NJ6 502 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 TEAD3Q99594 435 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 RAB11FIP5Q9BXF6 653 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ANKRD19PQ9H560 264 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 BEX1Q9HBH7 125 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ING3Q9NXR8 418 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 POLR2CP19387 275 aaPredicted RBP22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ERP29P30040 261 aaKnown RBP22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 PYCR1P32322 319 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 SFXN4Q6P4A7 337 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 IGFLR1Q9H665 355 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 TRAPPC13A5PLN9 417 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC9B1P1A6NJY1 282 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 LAMP2P13473 410 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 FCARP24071 287 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 THBS2P35442 1172 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 TMEM240Q5SV17 173 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ZC3HAV1LQ96H79 300 aaKnown RBP22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ORAI3Q9BRQ5 295 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 SRMSQ9H3Y6 488 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 NUDT15Q9NV35 164 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 MED17Q9NVC6 651 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 KLHL21Q9UJP4 597 aa22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 ZNF223Q9UK11 482 aaPredicted RBP22.61■■□□□ 1.21
SPTSSA-201ENST00000298130 CDHR4A6H8M9 788 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 PRR23D1E9PI22 279 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 PRR23D2P0DMB1 279 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 ARHGAP11BQ3KRB8 267 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 DCST2Q5T1A1 773 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 FAM109BQ6ICB4 259 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 METAP1DQ6UB28 335 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 RANBP3LQ86VV4 465 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 IZUMO1Q8IYV9 350 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 COX18Q8N8Q8 333 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 OR5M3Q8NGP4 307 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 TRMT10AQ8TBZ6 339 aaKnown RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 PATE1Q8WXA2 126 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 BPIFA2Q96DR5 249 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 MEPEQ9NQ76 525 aaPredicted RBP22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 SPTBP11277 2137 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms