RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TMEM239Q8WW34 195 aa20.98■□□□□ 0.95
PTX3-201ENST00000295927 POLR1BQ9H9Y6 1135 aa20.98■□□□□ 0.95
PTX3-201ENST00000295927 IMPAD1Q9NX62 359 aa20.98■□□□□ 0.95
PTX3-201ENST00000295927 PCNX2A6NKB5 2137 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 LOC102723996A0A087X1L8 192 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 M0R129 80 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 OIP5O43482 229 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 CHP2O43745 196 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 UBL4AP11441 157 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 GPR4P46093 362 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 NADK2Q4G0N4 442 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 SLX4IPQ5VYV7 408 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 ZNF773Q6PK81 442 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 PIP4P1Q86T03 277 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 KIF18BQ86Y91 864 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 RNF113BQ8IZP6 322 aaKnown RBP20.97■□□□□ 0.95
PTX3-201ENST00000295927 CADM2Q8N3J6 435 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 DDA1Q9BW61 102 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 DSN1Q9H410 356 aa20.97■□□□□ 0.95
PTX3-201ENST00000295927 WDFY3Q8IZQ1 3526 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 EXPH5Q8NEV8 1989 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 A0A1W2PNU3 283 aaPredicted RBP20.96■□□□□ 0.95
PTX3-201ENST00000295927 KLF4O43474 513 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 FPR3P25089 353 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 NRG3P56975 720 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 TRIP6Q15654 476 aaKnown RBP20.96■□□□□ 0.95
PTX3-201ENST00000295927 FOXB2Q5VYV0 432 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 KIRREL2Q6UWL6 708 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 CCDC103Q8IW40 242 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 POGLUT1Q8NBL1 392 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 OR2Y1Q8NGV0 311 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 OR8K3Q8NH51 312 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 PAK1IP1Q9NWT1 392 aaPredicted RBP20.96■□□□□ 0.95
PTX3-201ENST00000295927 TMEM200CA6NKL6 621 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 PTGES3LE9PB15 166 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 GTPBP1O00178 669 aaKnown RBP20.96■□□□□ 0.95
PTX3-201ENST00000295927 LINGO3P0C6S8 592 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 GABRB1P18505 474 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 SKP2Q13309 424 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 PCOLCEQ15113 449 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 ALG10BQ5I7T1 473 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 RASSF6Q6ZTQ3 369 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 PFN4Q8NHR9 129 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 DEPDC7Q96QD5 511 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 RTN4RQ9BZR6 473 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 EGLN3Q9H6Z9 239 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 KRCC1Q9NPI7 259 aaPredicted RBP20.96■□□□□ 0.95
PTX3-201ENST00000295927 FAM86C1Q9NVL1 165 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 RPS6KB2Q9UBS0 482 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 PADI1Q9ULC6 663 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 CARD8Q9Y2G2 431 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 NPFFR2Q9Y5X5 522 aa20.96■□□□□ 0.95
PTX3-201ENST00000295927 CCDC187A0A096LP49 1063 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 PLD2O14939 933 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 ZNF264O43296 627 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 NGFRP08138 427 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 STAT5AP42229 794 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 ALDH3B2P48448 385 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 BROXQ5VW32 411 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 C12orf73Q69YU5 71 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 ULK3Q6PHR2 472 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 CBLN3Q6UW01 205 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 C6orf15Q6UXA7 325 aaPredicted RBP20.95■□□□□ 0.94
PTX3-201ENST00000295927 TIPARPQ7Z3E1 657 aaKnown RBP20.95■□□□□ 0.94
PTX3-201ENST00000295927 OR5L2Q8NGL0 311 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 PLA2G12AQ9BZM1 189 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 ZBTB20Q9HC78 741 aaPredicted RBP20.95■□□□□ 0.94
PTX3-201ENST00000295927 EXOSC3Q9NQT5 275 aaKnown RBP20.95■□□□□ 0.94
PTX3-201ENST00000295927 TPRKBQ9Y3C4 175 aa20.95■□□□□ 0.94
PTX3-201ENST00000295927 OR6C70A6NIJ9 312 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 C9orf172C9J069 976 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 ZNF354AO60765 605 aaPredicted RBP20.94■□□□□ 0.94
PTX3-201ENST00000295927 ZFAND5O76080 213 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 OR6B1O95007 311 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 DLGAP3O95886 979 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 PIGFQ07326 219 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 HES3Q5TGS1 186 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 P3H2Q8IVL5 708 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 IQCF1Q8N6M8 205 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 MPP4Q96JB8 637 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 HS6ST2Q96MM7 605 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 SCN3BQ9NY72 215 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 A0A1W2PQD3 144 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 ALG1L2C9J202 215 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 WWP2O00308 870 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 KPNA4O00629 521 aaPredicted RBP20.94■□□□□ 0.94
PTX3-201ENST00000295927 FAM20BO75063 409 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 HTR1AP08908 422 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 IFI30P13284 250 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 FOLR3P41439 243 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 GIPRP48546 466 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 COPZ1P61923 177 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 PRKCDQ05655 676 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 GINS1Q14691 196 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 STPG1Q5TH74 334 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 PTCHD4Q6ZW05 846 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 MARCH3Q86UD3 253 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 TMCO5AQ8N6Q1 288 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 LRFN3Q9BTN0 628 aa20.94■□□□□ 0.94
PTX3-201ENST00000295927 ZNF426Q9BUY5 554 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 334.7 ms