RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OTX2P32243 289 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 KCNJ10P78508 379 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SYPL1Q16563 259 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 ATAD3CQ5T2N8 411 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 FAM198BQ6UWH4 519 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 PDZD9Q8IXQ8 264 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 CCDC86Q9H6F5 360 aaKnown RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 NCDNQ9UBB6 729 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SLC22A7Q9Y694 548 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 FRS3O43559 492 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 IDUAP35475 653 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 PTH2RP49190 550 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 FNTBP49356 437 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 GALNT6Q8NCL4 622 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 OR14A16Q8NHC5 309 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ZFP90Q8TF47 636 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 TBC1D20Q96BZ9 403 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 SLC25A44Q96H78 314 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 MS4A8Q9BY19 250 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 NT5DC2Q9H857 520 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 PRSS16Q9NQE7 514 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 TEX10Q9NXF1 929 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF175Q9Y473 711 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 SEC14L5O43304 696 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM225BP0DP42 221 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 MEF2DQ14814 521 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 PCGF3Q3KNV8 242 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 C6orf183Q5T699 404 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 LRRC28Q86X40 367 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 TREX2Q9BQ50 279 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 KCMF1Q9P0J7 381 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 USP36Q9P275 1121 aaKnown RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 COL22A1Q8NFW1 1626 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 BPNT1O95861 308 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 AKAIN1P0CW23 69 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 GM2AP17900 193 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ACVR1Q04771 509 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 HAGHLQ6PII5 290 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 FAM217AQ8IXS0 508 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 SLC35F3Q8IY50 421 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ANKRD19PQ9H560 264 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM38AQ9H6F2 299 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 SLAMF8Q9P0V8 285 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 KCNK5O95279 499 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 KLKB1P03952 638 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 IFNGR1P15260 489 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 LSSP48449 732 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 CASP6P55212 293 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 RPL22L1Q6P5R6 122 aaKnown RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ABHD12BQ7Z5M8 362 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 DPCDQ9BVM2 203 aaPredicted RBP11.98□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF160Q9HCG1 818 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 PARPBPQ9NWS1 579 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 V9GY05 133 aa11.98□□□□□ -0.49
PTCD1-201ENST00000292478 PAHP00439 452 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 PSMB5P28074 263 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 MANEAQ5SRI9 462 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 LYSMD4Q5XG99 296 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 FCRLBQ6BAA4 426 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ANKRD54Q6NXT1 300 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 MISPQ8IVT2 679 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CD300LFQ8TDQ1 290 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 THAP10Q9P2Z0 257 aaPredicted RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 LAMB1P07942 1786 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CDHR4A6H8M9 788 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 AKR1C4P17516 323 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 GAREM2Q75VX8 874 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 MAVSQ7Z434 540 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 DNAJC22Q8N4W6 341 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 NEURL3Q96EH8 262 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 DNAJA3Q96EY1 480 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR5B2Q96R09 309 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 P2RY12Q9H244 342 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 MOKQ9UQ07 419 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 AK6Q9Y3D8 172 aaKnown RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 H0YGG7 62 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 BOLA2-SMG1P6H3BVE0 249 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ACOT8O14734 319 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 GALR3O60755 368 aaPredicted RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OPRD1P41143 372 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CXCL12P48061 93 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RGS19P49795 217 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ARF3P61204 181 aaPredicted RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ERVK-25P63136 954 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 PTPRRQ15256 657 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR5D14Q8NGL3 314 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 PBDC1Q9BVG4 233 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 MRPL15Q9P015 296 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms