RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CLDN24A6NM45 220 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 TSPAN15O95858 294 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 CD22P20273 847 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 AHRP35869 848 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 RPS5P46782 204 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 RASGEF1BQ0VAM2 473 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 RNASE10Q5GAN6 216 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC46A3Q7Z3Q1 461 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 ACBD4Q8NC06 268 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 PAQR8Q8TEZ7 354 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 SMARCD2Q92925 531 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 C11orf54Q9H0W9 315 aaPredicted RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 DUSP21Q9H596 190 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 THSD1Q9NS62 852 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 KLHL9Q9P2J3 617 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 C1orf226A1L170 272 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CLDN4O14493 209 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ARSBP15848 533 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 MAPK3P27361 379 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 MMP12P39900 470 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 IDH3GP51553 393 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CDK3Q00526 305 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 IRAK1BP1Q5VVH5 260 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC22A8Q8TCC7 542 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 NXPE3Q969Y0 559 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 USP36Q9P275 1121 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PCDHGB2Q9Y5G2 931 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 LRRTM2O43300 516 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 EMP3P54852 163 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CHRNEQ04844 493 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 EIF4EBP2Q13542 120 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 OPCMLQ14982 345 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 KIAA0040Q15053 153 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ZNF674Q2M3X9 581 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PRSS36Q5K4E3 855 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ALKBH2Q6NS38 261 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 OR2AJ1Q8NGZ0 328 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 OR56A3Q8NH54 315 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC22A18Q96BI1 424 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SPNS1Q9H2V7 528 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 IL21RQ9HBE5 538 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 STARD5Q9NSY2 213 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 TRBV5-4A0A0C4DH59 114 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 FAM171A2A8MVW0 826 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 F5H5P2 479 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PPM1DO15297 605 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 RGS9O75916 674 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 OR8U9P0C7N5 309 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CD34P28906 385 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 MFSD13AQ14CX5 517 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ASPGQ86U10 573 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 NRTNQ99748 197 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 NT5DC2Q9H857 520 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SEC61A2Q9H9S3 476 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 RASD1Q9Y272 281 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 NUBP2Q9Y5Y2 271 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 UPK1AO00322 258 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SSX4O60224 188 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 LDB3O75112 727 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 ITGB7P26010 798 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 IRS1P35568 1242 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 UGT2B10P36537 528 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PCGF3Q3KNV8 242 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 HENMT1Q5T8I9 393 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 C18orf63Q68DL7 685 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SSX9Q7RTT3 188 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 GID4Q8IVV7 300 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 SAMD14Q8IZD0 417 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PNO1Q9NRX1 252 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 RBFOX1Q9NWB1 397 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 FBXL2Q9UKC9 423 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 PLEKHM1Q9Y4G2 1056 aa11.76□□□□□ -0.53
SLC6A1-201ENST00000287766 MEIS3P1A6NDR6 274 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 PLPP1O14494 284 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC34A2O95436 690 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 RPS2P15880 293 aaKnown RBP11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 NDUFV2P19404 249 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 CAMLGP49069 296 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 ART1P52961 327 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 ZNF33BQ06732 778 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 RUNX3Q13761 415 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 AMZ1Q400G9 498 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 KCTD20Q7Z5Y7 419 aa11.75□□□□□ -0.53
SLC6A1-201ENST00000287766 MS4A15Q8N5U1 240 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms