RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SMCO3A2RU48 225 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 WASH4PA8MWX3 477 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 DYRK1AQ13627 763 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 SYNPRQ8TBG9 265 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 ZDHHC12Q96GR4 267 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 DEFB126Q9BYW3 111 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 DNTTIP1Q9H147 329 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CWH43Q9H720 699 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 UFSP2Q9NUQ7 469 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 PSORS1C1Q9UIG5 152 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 AP1M2Q9Y6Q5 423 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CICQ96RK0 1608 aaPredicted RBP15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 DRGXA6NNA5 263 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CACNG3O60359 315 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 PEA15Q15121 130 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 SYPL1Q16563 259 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 OR5T1Q8NG75 326 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 OR2T11Q8NH01 316 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 APMAPQ9HDC9 416 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 ZMAT5Q9UDW3 170 aaKnown RBP15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 HEPACAM2A8MVW5 462 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 ACOT7O00154 380 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 ATXN1LP0C7T5 689 aaKnown RBP15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 PLP2Q04941 152 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CST6Q15828 149 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC2A11Q9BYW1 496 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 RPH3AQ9Y2J0 694 aaPredicted RBP15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CASC3O15234 703 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 ADRA1AP35348 466 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 GIPRP48546 466 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 LUMP51884 338 aaPredicted RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 EMP3P54852 163 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CSNK2A1P68400 391 aaPredicted RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CYCSP99999 105 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CSNK2A3Q8NEV1 391 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CDC6Q99741 560 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 C2orf42Q9NWW7 574 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 TPT1P13693 172 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 MRPS10P82664 201 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 ELOCQ15369 112 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 P2RY14Q15391 338 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 BAK1Q16611 211 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CLLU1OSQ5K130 101 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 TIGD3Q6B0B8 471 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 LMNTD1Q8N9Z9 388 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 GPR148Q8TDV2 347 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 NPRL2Q8WTW4 380 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CPPED1Q9BRF8 314 aaPredicted RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC38A1Q9H2H9 487 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 OR52D1Q9H346 318 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 REV1Q9UBZ9 1251 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 LSM5Q9Y4Y9 91 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 PTHP01270 115 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF674Q2M3X9 581 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 PTRH1Q86Y79 214 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 CDRT4Q8N9R6 151 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 GIMAP1Q8WWP7 306 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 TOMM40LQ969M1 308 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 RBM38Q9H0Z9 239 aaKnown RBP15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.07
SH3RF1-201ENST00000284637 UNCXA6NJT0 531 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 SMLR1H3BR10 107 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 TP53I11O14683 189 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 TGM5O43548 720 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 SYT7O43581 403 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 DIRAS3O95661 229 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 CSF2RAP15509 400 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 APEX1P27695 318 aaKnown RBP15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 GZMKP49863 264 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 PAN3Q58A45 887 aaKnown RBP15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 TOR2AQ5JU69 321 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 USP53Q70EK8 1073 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 FAM122BQ7Z309 247 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 ACOT4Q8N9L9 421 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 OR10K1Q8NGX5 313 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 DYNC2LI1Q8TCX1 351 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 BPIFA2Q96DR5 249 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 C12orf57Q99622 126 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 LDAHQ9H6V9 325 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 ICKQ9UPZ9 632 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 B3GALT1Q9Y5Z6 326 aa15.46■□□□□ 0.06
SH3RF1-201ENST00000284637 TRAV27A0A087WT01 109 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 OR5K4A6NMS3 321 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 SSX4O60224 188 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 MPIG6BO95866 241 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TMEM225BP0DP42 221 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 LIPAP38571 399 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TUBB3Q13509 450 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PPA1Q15181 289 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TCTE1Q5JU00 501 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF425Q6IV72 752 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PAPD4Q6PIY7 484 aaKnown RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TMEM163Q8TC26 289 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ACOT11Q8WXI4 607 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 NOX3Q9HBY0 568 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 SDHAF2Q9NX18 166 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TCRBV21S2A2A0A5A6 115 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 OR2A25A4D2G3 310 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms