RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PLPP5Q8NEB5 264 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 PROKR2Q8NFJ6 384 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 OR2T33Q8NG76 320 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 SLC2A12Q8TD20 617 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 GRHL3Q8TE85 626 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 PHOX2BQ99453 314 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 ZNF426Q9BUY5 554 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 NUDT9Q9BW91 350 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 OR8D2Q9GZM6 311 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 ENKD1Q9H0I2 346 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 NXF5Q9H1B4 397 aaKnown RBP8.83□□□□□ -1
TRIM55-201ENST00000276573 OR52D1Q9H346 318 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 GAREM1Q9H706 876 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 FGF20Q9NP95 211 aaPredicted RBP8.83□□□□□ -1
TRIM55-201ENST00000276573 MKKSQ9NPJ1 570 aaPredicted RBP8.83□□□□□ -1
TRIM55-201ENST00000276573 IL20RAQ9UHF4 553 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 PCDHGA3Q9Y5H0 932 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 ARID1BQ8NFD5 2236 aaPredicted RBP8.83□□□□□ -1
TRIM55-201ENST00000276573 IRGMA1A4Y4 181 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 KPNA4O00629 521 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 RFPL3O75679 317 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RCBTB2O95199 551 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RAB36O95755 333 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RPLP0P05388 317 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 ANKRD34CP0C6C1 535 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 TBXA2RP21731 343 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ADH7P40394 386 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RBM34P42696 430 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 CLK1P49759 484 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 BMXP51813 675 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 LIMK1P53667 647 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 FXYD6P3P58550 94 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ACY1Q03154 408 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 DOC2BQ14184 412 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SPHARQ15513 63 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 NSDHLQ15738 373 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 DGUOKQ16854 277 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ALG10BQ5I7T1 473 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ULK3Q6PHR2 472 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 HSDL2Q6YN16 418 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RABEPKQ7Z6M1 372 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SLCO6A1Q86UG4 719 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 LSRQ86X29 649 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 C1orf210Q8IVY1 113 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 EID2Q8N6I1 236 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OIT3Q8WWZ8 545 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ADIPOR1Q96A54 375 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 EFHD2Q96C19 240 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 PLEKHA8Q96JA3 519 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 LCORQ96JN0 433 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 LMF1Q96S06 567 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RACGAP1Q9H0H5 632 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OR51E2Q9H255 320 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 LRRN3Q9H3W5 708 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 UBQLN4Q9NRR5 601 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SLC22A11Q9NSA0 550 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SIGLEC7Q9Y286 467 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SDK1Q7Z5N4 2213 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 TNRC6BQ9UPQ9 1833 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 DNAH14Q0VDD8 3507 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 UNC13CQ8NB66 2214 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 FRG2CA6NGY1 282 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ARHGAP33O14559 1287 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 YKT6O15498 198 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 CSO75390 466 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 SLC2A10O95528 541 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 NADKO95544 446 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 CFIP05156 583 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 BMP7P18075 431 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 TGFBR1P36897 503 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ETV5P41161 510 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 MTNR1AP48039 350 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ETV1P50549 477 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 DCAF7P61962 342 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RAB40BQ12829 278 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 TSTQ16762 297 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 TMEM44Q2T9K0 475 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 NDUFAF6Q330K2 333 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ZNF829Q3KNS6 432 aaPredicted RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 C3orf38Q5JPI3 329 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 KIRREL2Q6UWL6 708 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 LINC00299Q6ZSB3 139 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 COX15Q7KZN9 410 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 BMP8AQ7Z5Y6 402 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 CROCCP3Q8IVE0 287 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SLITRK4Q8IW52 837 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ZNF440Q8IYI8 595 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 PRSS58Q8IYP2 241 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 CADM2Q8N3J6 435 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OR4D9Q8NGE8 314 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OR14A16Q8NHC5 309 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 DAZLQ92904 295 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 RFKQ969G6 155 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ZHX1-C8orf76Q96EF9 292 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RNFT2Q96EX2 444 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 VMP1Q96GC9 406 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ZC3H10Q96K80 434 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms