RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MAPK14Q16539 360 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 CDC20BQ86Y33 519 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
HMGN3-201ENST00000275036 GPR119Q8TDV5 335 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 ARSGQ96EG1 525 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 SLC35A5Q9BS91 424 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 NMUR2Q9GZQ4 415 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 TMEM185BQ9H7F4 350 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 PACSIN3Q9UKS6 424 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
HMGN3-201ENST00000275036 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 STX11O75558 287 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 UGT2B17O75795 530 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 AK1P00568 194 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 CGAP01215 116 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 CRHP06850 196 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 EPXP11678 715 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 PEX19P40855 299 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 EIF1AXP47813 144 aaKnown RBP12.94□□□□□ -0.34
HMGN3-201ENST00000275036 ART1P52961 327 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 RPS3AP61247 264 aaKnown RBP12.94□□□□□ -0.34
HMGN3-201ENST00000275036 RAC1P63000 192 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 SIRPAP78324 504 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF141Q15928 474 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 TYW3Q6IPR3 259 aaKnown RBP12.94□□□□□ -0.34
HMGN3-201ENST00000275036 CNEP1R1Q8N9A8 125 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 OR10D3Q8NH80 312 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 ATP6V1G3Q96LB4 118 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 OR52E6Q96RD3 313 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 SLC6A13Q9NSD5 602 aa12.94□□□□□ -0.34
HMGN3-201ENST00000275036 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
HMGN3-201ENST00000275036 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 CCDC154A6NI56 674 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 H3BNH8 94 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 HMGN4O00479 90 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 TNFSF11O14788 317 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ADAMDEC1O15204 470 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF264O43296 627 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 CXCL13O43927 109 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 KIAA0513O60268 411 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 BCAS1O75363 584 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 NTN1O95631 604 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 NUDT14O95848 222 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 GSNP06396 782 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 UBL4AP11441 157 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 PRKCAP17252 672 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 CHI3L1P36222 383 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 CPA2P48052 419 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SKP2Q13309 424 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SGCBQ16585 318 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 PDCD4Q53EL6 469 aaKnown RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 FRRS1Q6ZNA5 592 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 C16orf62Q7Z3J2 963 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 HMGN2P46Q86SG4 172 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 RNF130Q86XS8 419 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 LILRA2Q8N149 483 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ROPN1LQ96C74 230 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ZG16BQ96DA0 208 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 PANX1Q96RD7 426 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 OPN3Q9H1Y3 402 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 SLCO1B3Q9NPD5 702 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
HMGN3-201ENST00000275036 PRRC2AP48634 2157 aaKnown RBP12.93□□□□□ -0.34
HMGN3-201ENST00000275036 MSTNO14793 375 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 EIF4E2O60573 245 aaKnown RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 DNAJA2O60884 412 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 SLC22A3O75751 556 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 ROS1P08922 2347 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 NID1P14543 1247 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 IDO1P14902 403 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 ELK4P28324 431 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 CCKARP32238 428 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 SFTPDP35247 375 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 CPOXP36551 454 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 EIF1P41567 113 aaKnown RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 KHKP50053 298 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 PLAURQ03405 335 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms