RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SETXQ7Z333 2677 aaKnown RBP22.59■■□□□ 1.21
SSBP4-201ENST00000270061 NINQ8N4C6 2090 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 GXYLT2A0PJZ3 443 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 CCNB2O95067 398 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 KCNK2O95069 426 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 CLPSP04118 112 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 H1F0P07305 194 aaKnown RBP22.58■■□□□ 1.21
SSBP4-201ENST00000270061 TRHRP34981 398 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-201ENST00000270061 ARG2P78540 354 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 HMGN2P46Q86SG4 172 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 CISD2Q8N5K1 135 aaKnown RBP22.58■■□□□ 1.21
SSBP4-201ENST00000270061 SLC5A8Q8N695 610 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 GALNT11Q8NCW6 608 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 SNRNP40Q96DI7 357 aaKnown RBP22.58■■□□□ 1.21
SSBP4-201ENST00000270061 GRIP2Q9C0E4 1043 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 TEKT2Q9UIF3 430 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 MYRFQ9Y2G1 1151 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 PCDHGA10Q9Y5H3 936 aa22.58■■□□□ 1.21
SSBP4-201ENST00000270061 E9PQ18 207 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 H3BNH8 94 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 DYRK3O43781 588 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF169Q14929 603 aaPredicted RBP22.58■■□□□ 1.2
SSBP4-201ENST00000270061 ELAVL1Q15717 326 aaKnown RBP22.58■■□□□ 1.2
SSBP4-201ENST00000270061 NPTX1Q15818 432 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 EIPR1Q53HC9 387 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 B3GNTL1Q67FW5 361 aaPredicted RBP22.58■■□□□ 1.2
SSBP4-201ENST00000270061 C16orf52Q8NHV5 167 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 M1APQ8TC57 530 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 SENP5Q96HI0 755 aaPredicted RBP22.58■■□□□ 1.2
SSBP4-201ENST00000270061 PRRC1Q96M27 445 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 FUZQ9BT04 418 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 YTHDF1Q9BYJ9 559 aaKnown RBP22.58■■□□□ 1.2
SSBP4-201ENST00000270061 PTPN13Q12923 2485 aa22.58■■□□□ 1.2
SSBP4-201ENST00000270061 A0A1W2PRQ8 180 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 OXSR1O95747 527 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-201ENST00000270061 IL7RP16871 459 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 EEF1A1P68104 462 aaKnown RBP22.57■■□□□ 1.2
SSBP4-201ENST00000270061 DGCR6Q14129 220 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 GPR68Q15743 365 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 LIN52Q52LA3 116 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 ABHD17BQ5VST6 288 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 GALNT5Q7Z7M9 940 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 OFCC1Q8IZS5 231 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 TAGAPQ8N103 731 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 GABARAPL3Q9BY60 117 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 PNO1Q9NRX1 252 aaKnown RBP22.57■■□□□ 1.2
SSBP4-201ENST00000270061 FBXO34Q9NWN3 711 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 RHCGQ9UBD6 479 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 TMCC3Q9ULS5 477 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 HIVEP3Q5T1R4 2406 aa22.57■■□□□ 1.2
SSBP4-201ENST00000270061 USP9XQ93008 2570 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-201ENST00000270061 A6NHS1 94 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 CT45A8P0DMV1 189 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 CT45A9P0DMV2 189 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 FUT4P22083 530 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 CBLP22681 906 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 ELAVL4P26378 380 aaKnown RBP22.56■■□□□ 1.2
SSBP4-201ENST00000270061 KEAP1Q14145 624 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 CT45A2Q5DJT8 189 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF770Q6IQ21 691 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-201ENST00000270061 THAP5Q7Z6K1 395 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 C8orf59Q8N0T1 100 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-201ENST00000270061 CLIP4Q8N3C7 705 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 HAS2Q92819 552 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 RMND5BQ96G75 393 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-201ENST00000270061 EVA1AQ9H8M9 152 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 MMP25Q9NPA2 562 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 ASF1BQ9NVP2 202 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 PLA2G3Q9NZ20 509 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 DTX4Q9Y2E6 619 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 POFUT2Q9Y2G5 429 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 ZGRF1Q86YA3 2104 aa22.56■■□□□ 1.2
SSBP4-201ENST00000270061 FAAHO00519 579 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 UGT2B17O75795 530 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 NID1P14543 1247 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 POLR2IP36954 125 aaKnown RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 PIN1Q13526 163 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 DCST1Q5T197 706 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 RNF220Q5VTB9 566 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF691Q5VV52 312 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 TTC33Q6PID6 262 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 FIGNL1Q6PIW4 674 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 NPSR1Q6W5P4 371 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF836Q6ZNA1 936 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 FNDC11Q9BVV2 318 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 Q9N2J8 555 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 STMN3Q9NZ72 180 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 KCNE5Q9UJ90 142 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 CFL2Q9Y281 166 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 GPR55Q9Y2T6 319 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 CLCA3PQ9Y6N3 262 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 TRBV4-1A0A0J9YWV2 114 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 IGKV3-11P04433 115 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 SMIM18P0DKX4 95 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 RYKP34925 604 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 GTF2A1P52655 376 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 SLC37A1P57057 533 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 SLC26A5P58743 744 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 NPRL3Q12980 569 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 MAPK14Q16539 360 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms