RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 IL21RQ9HBE5 538 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 CMC2Q9NRP2 79 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 FBXO34Q9NWN3 711 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
BEST3-201ENST00000266661 NLKQ9UBE8 527 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 PCOLCE2Q9UKZ9 415 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 DAPP1Q9UN19 280 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 SATB2Q9UPW6 733 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 SLC22A7Q9Y694 548 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
BEST3-201ENST00000266661 CDHR4A6H8M9 788 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 E9PI62 339 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SCAMP1O15126 338 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PLPP2O43688 288 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 CTSVO60911 334 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 C1QBP02746 253 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 CPMP14384 443 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 NID1P14543 1247 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 NDUFS1P28331 727 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 RFX3P48380 749 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SIM1P81133 766 aaPredicted RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 GALK2Q01415 458 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 RGS1Q08116 209 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 MGAT2Q10469 447 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 FAPQ12884 760 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 OR1Q1Q15612 314 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 CCNJQ5T5M9 372 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 FCRL6Q6DN72 434 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PXKQ7Z7A4 578 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 OR4N5Q8IXE1 308 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SHISA5Q8N114 240 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PFN4Q8NHR9 129 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 TMEM239Q8WW34 195 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 HOXB13Q92826 284 aaPredicted RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 OR2M4Q96R27 311 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 MKRN2Q9H000 416 aaKnown RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.53□□□□□ -0.56
BEST3-201ENST00000266661 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 INPP5EQ9NRR6 644 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 ADAM30Q9UKF2 790 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 A0A087WV62 115 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 A0A0X1KG70 313 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PRSS38A1L453 326 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 A6NCN8 305 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 LANCL1O43813 399 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 APODP05090 189 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 IFI6P09912 130 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 PSKH1P11801 424 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 HK1P19367 917 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SHC1P29353 583 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SLC6A1P30531 599 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 FOXK2Q01167 660 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 FHL1Q13642 323 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 SDE2Q6IQ49 451 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 RANBP3LQ86VV4 465 aaPredicted RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 SLC37A3Q8NCC5 494 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 OR4M2Q8NGB6 313 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 ASB12Q8WXK4 309 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 OR1E3Q8WZA6 343 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 CD180Q99467 661 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 TEAD3Q99594 435 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 GON7Q9BXV9 100 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 KRCC1Q9NPI7 259 aaPredicted RBP11.53□□□□□ -0.56
BEST3-201ENST00000266661 DUSP22Q9NRW4 184 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
BEST3-201ENST00000266661 COL4A2P08572 1712 aa11.52□□□□□ -0.56
BEST3-201ENST00000266661 FAM240BA0A1B0GVZ2 78 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 K7EQS6 105 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 ALX3O95076 343 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 ATP1B1P05026 303 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 PRKCAP17252 672 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 PTNP21246 168 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 ATP6V1E1P36543 226 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 ADPRHP54922 357 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 BTG1P62324 171 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 E2F1Q01094 437 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 ZNF85Q03923 595 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 GPR176Q14439 515 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 SUZ12Q15022 739 aaKnown RBP11.52□□□□□ -0.57
BEST3-201ENST00000266661 DCST2Q5T1A1 773 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 MRPL2Q5T653 305 aaKnown RBP11.52□□□□□ -0.57
BEST3-201ENST00000266661 LAMTOR1Q6IAA8 161 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 OAFQ86UD1 273 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 LRRC28Q86X40 367 aaPredicted RBP11.52□□□□□ -0.57
BEST3-201ENST00000266661 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 OR5W2Q8NH69 310 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 OR14C36Q8NHC7 312 aa11.52□□□□□ -0.57
BEST3-201ENST00000266661 FANK1Q8TC84 345 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms