RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF6-201ENST00000266079 UCN3Q969E3 161 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 C1GALT1C1Q96EU7 318 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF578Q96N58 590 aaPredicted RBP11.75□□□□□ -0.53
PRPF6-201ENST00000266079 PELI2Q9HAT8 420 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 PTTG3PQ9NZH4 202 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 POMT2Q9UKY4 750 aa11.75□□□□□ -0.53
PRPF6-201ENST00000266079 YARS2Q9Y2Z4 477 aaKnown RBP11.75□□□□□ -0.53
PRPF6-201ENST00000266079 SPIN1Q9Y657 262 aaPredicted RBP11.75□□□□□ -0.53
PRPF6-201ENST00000266079 A0A0A6YYJ9 748 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 LY6G6EA0A0G2JKS1 128 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 A0A0J9YY10 115 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 IFNA7P01567 189 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 KLK1P06870 262 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 RRASP10301 218 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 FEN1P39748 380 aaKnown RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 VSX2P58304 361 aaPredicted RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ELOAQ14241 798 aaKnown RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 RABEPKQ7Z6M1 372 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 AMER3Q8N944 861 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 SUMF1Q8NBK3 374 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 OR4K1Q8NGD4 311 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ZFPM2Q8WW38 1151 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 GEMIN6Q8WXD5 167 aaKnown RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 TM9SF4Q92544 642 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 CCDC3Q9BQI4 270 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 DUSP23Q9BVJ7 150 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 NCDNQ9UBB6 729 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 NDOR1Q9UHB4 597 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 U3KQA8 63 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 PCNX2A6NKB5 2137 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 AHCTF1Q8WYP5 2266 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 P2RX6O15547 441 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 CRATP43155 626 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 CLDN6P56747 220 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 RPS25P62851 125 aaKnown RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 NR0B2Q15466 257 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF770Q6IQ21 691 aaPredicted RBP11.74□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF425Q6IV72 752 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 MMP21Q8N119 569 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 WACQ9BTA9 647 aa11.74□□□□□ -0.53
PRPF6-201ENST00000266079 SERTM1A2A2V5 107 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 C4orf51C9J302 202 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ERI3O43414 337 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 AKAP8O43823 692 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 OSMP13725 252 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 C21orf58P58505 322 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 EXOSC2Q13868 293 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 CRTC2Q53ET0 693 aaPredicted RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 COMMD6Q7Z4G1 85 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 VN1R4Q7Z5H5 301 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 OR11H4Q8NGC9 324 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 PCNPQ8WW12 178 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 UBE2E3Q969T4 207 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 EDEM2Q9BV94 578 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 AICDAQ9GZX7 198 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 REV1Q9UBZ9 1251 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 GSTK1Q9Y2Q3 226 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ENTPD2Q9Y5L3 495 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ENPP4Q9Y6X5 453 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 LILRA5A6NI73 299 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 TOR1AO14656 332 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 SLC30A4O14863 429 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ETFAP13804 333 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 CD1CP29017 333 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 GSTM5P46439 218 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 CCL7P80098 99 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 RBBP4Q09028 425 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ILKQ13418 452 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 SCARB2Q14108 478 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 PRAMEF17Q5VTA0 474 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 C12orf73Q69YU5 71 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 CASP12Q6UXS9 341 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 QSOX2Q6ZRP7 698 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 WDR53Q7Z5U6 358 aaPredicted RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 BCDIN3DQ7Z5W3 292 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF655Q8N720 491 aaPredicted RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 SEMA4GQ9NTN9 838 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 RHCGQ9UBD6 479 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 ZNF222Q9UK12 451 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 DIMT1Q9UNQ2 313 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 SF3B6Q9Y3B4 125 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 FKBP7Q9Y680 259 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 TRBC2A0A5B9 178 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 H0YGG7 62 aa11.73□□□□□ -0.53
PRPF6-201ENST00000266079 GTPBP1O00178 669 aaKnown RBP11.73□□□□□ -0.53
PRPF6-201ENST00000266079 PLPP1O14494 284 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms