RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CTSCP53634 463 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 C5orf46Q6UWT4 87 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 PRSS45Q7RTY3 260 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 SLC39A11Q8N1S5 342 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 GLYATL2Q8WU03 294 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 UBE2E3Q969T4 207 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 GSDMCQ9BYG8 508 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 PLA2G12AQ9BZM1 189 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 FXYD6Q9H0Q3 95 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 ACAD8Q9UKU7 415 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 PGRMC2O15173 223 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 ITGA10O75578 1167 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 POP4O95707 220 aaKnown RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 SERPINA3P01011 423 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 EGFP01133 1207 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 EN2P19622 333 aaPredicted RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 IMPA1P29218 277 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 TNFRSF17Q02223 184 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 SEMG2Q02383 582 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 LMAN2Q12907 356 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 ZNF613Q6PF04 617 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 ZNF322Q6U7Q0 402 aaPredicted RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 SERPINA13PQ6UXR4 307 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 LDLRAD3Q86YD5 345 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 OR6V1Q8N148 313 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 HDDC3Q8N4P3 179 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 FAM98AQ8NCA5 519 aaKnown RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 RGMAQ96B86 450 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 CRB3Q9BUF7 120 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 PTDSS2Q9BVG9 487 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 EGLN3Q9H6Z9 239 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 DMRT3Q9NQL9 472 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 SPHK1Q9NYA1 384 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 MYEF2Q9P2K5 600 aaKnown RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 DYRK1BQ9Y463 629 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 YIPF1Q9Y548 306 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 GPR31O00270 319 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 GSTZ1O43708 216 aaPredicted RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 CREBL2O60519 120 aaPredicted RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 CD96P40200 585 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 RNF144AP50876 292 aaPredicted RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 CCR9P51686 369 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 PIN1Q13526 163 aaPredicted RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 SLC25A35Q3KQZ1 300 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 FAM74A1Q5RGS3 127 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 FAM27D1Q5T7N8 215 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 KIAA1161Q6NSJ0 714 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 C22orf39Q6P5X5 142 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 IQCHQ86VS3 1027 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 TRAM1L1Q8N609 369 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 TMIEQ8NEW7 156 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 OR4K5Q8NGD3 323 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 OR4D11Q8NGI4 311 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ZNF461Q8TAF7 563 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 HAVCR2Q8TDQ0 301 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 GPA33Q99795 319 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ZNF649Q9BS31 505 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 AUNIPQ9H7T9 357 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 A0A0G2JK05 382 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 TBX19O60806 448 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ABLIM3O94929 683 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 SOD2P04179 222 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ACRP10323 421 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 CCR8P51685 355 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 TMEM255AQ5JRV8 349 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ELP2Q6IA86 826 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 TPRA1Q86W33 373 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 RFKQ969G6 155 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 PNPLA2Q96AD5 504 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 NEURL3Q96EH8 262 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 MRPL48Q96GC5 212 aaKnown RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 ART5Q96L15 291 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ZNF354BQ96LW1 612 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ZNF558Q96NG5 402 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ZNF607Q96SK3 696 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
NUP54-201ENST00000264883 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 KLHL1Q9NR64 748 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 B4GALT6Q9UBX8 382 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 RCE1Q9Y256 329 aa12.22□□□□□ -0.45
NUP54-201ENST00000264883 RFXAPO00287 272 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 BCHEP06276 602 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 C1GALT1C1LP0DN25 315 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 GSTM3P21266 225 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms