RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 OR4K13Q8NH42 304 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 S100PBPQ96BU1 408 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 NKX3-1Q99801 234 aaPredicted RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 MED18Q9BUE0 208 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 XKR8Q9H6D3 395 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 HLA-DQA2P01906 255 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 HMGN2P05204 90 aaKnown RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 GKN3PP0CG01 181 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 UGT2B7P16662 529 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 GPR1P46091 355 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 CCR4P51679 360 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 MPEG1Q2M385 716 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 PLPP6Q8IY26 295 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 SYNPRQ8TBG9 265 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 WFDC5Q8TCV5 224 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 WBP2Q969T9 261 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 PFDN5Q99471 154 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 HRH4Q9H3N8 390 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ZSCAN32Q9NX65 697 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ANTXRLA6NF34 631 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ID2Q02363 134 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 PDZK1IP1Q13113 114 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 PRAMEF14Q5SWL7 426 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ZNF772Q68DY9 489 aaPredicted RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 SIRT6Q8N6T7 355 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ZNF480Q8WV37 535 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 OR5P2Q8WZ92 322 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 KLHL15Q96M94 604 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 ZNF559Q9BR84 538 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 CHMP1AQ9HD42 196 aaPredicted RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 LHX3Q9UBR4 397 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 AIPO00170 330 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 PI15O43692 258 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 CTSOP43234 321 aaPredicted RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 KCNJ5P48544 419 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 MTNR1BP49286 362 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 SNRPEP62304 92 aaKnown RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 GLT8D1Q68CQ7 371 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 ARL14Q8N4G2 192 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 BVESQ8NE79 360 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 BPIFCQ8NFQ6 507 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 AIF1LQ9BQI0 150 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 DMRT3Q9NQL9 472 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 KCNMB2Q9Y691 235 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 WDPCPO95876 746 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 HTR2AP28223 471 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 MEOX2P50222 304 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 RING1Q06587 406 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 LINC00303Q3SY05 128 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 MTSS1LQ765P7 747 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 LINC00469Q8N7U9 141 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 OR10R2Q8NGX6 335 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 YIPF5Q969M3 257 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 TMEM38AQ9H6F2 299 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 HRASLSQ9HDD0 168 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 BTAF1O14981 1849 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 PSME4Q14997 1843 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 MBLAC1A4D2B0 266 aaPredicted RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 H7C0S8 307 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 CASC3O15234 703 aaKnown RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 ZNF432O94892 652 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 CLUP10909 449 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 IMPA1P29218 277 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 FGF9P31371 208 aaPredicted RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 MAPK8P45983 427 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 CCR9P51686 369 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 B2MP61769 119 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 TAF1CQ15572 869 aaPredicted RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 ZXDCQ2QGD7 858 aaPredicted RBP15.2■□□□□ 0.02
GPC1-201ENST00000264039 ARMC10Q8N2F6 343 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 SVBPQ8N300 66 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 UBTD2Q8WUN7 234 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 UROC1Q96N76 676 aa15.2■□□□□ 0.02
GPC1-201ENST00000264039 TRAV27A0A087WT01 109 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 CDHR4A6H8M9 788 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 FABP1P07148 127 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 ATF1P18846 271 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 KHKP50053 298 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 ADAM8P78325 824 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 RIN1Q13671 783 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 PGGHGQ32M88 737 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 GGTA1PQ4G0N0 100 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 CHST4Q8NCG5 386 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 STOML3Q8TAV4 291 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 ATOH1Q92858 354 aaPredicted RBP15.19■□□□□ 0.02
GPC1-201ENST00000264039 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
GPC1-201ENST00000264039 CAMK1GQ96NX5 476 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 CHST8Q9H2A9 424 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 ZMAT3Q9HA38 289 aaKnown RBP15.19■□□□□ 0.02
GPC1-201ENST00000264039 MRPS30Q9NP92 439 aaKnown RBP15.19■□□□□ 0.02
GPC1-201ENST00000264039 SLC7A7Q9UM01 511 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 SLC6A5Q9Y345 797 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 TRAV18A0A075B6X5 111 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 NPIPA5A0A0B4J1W7 369 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 MYADML2A6NDP7 307 aa15.19■□□□□ 0.02
GPC1-201ENST00000264039 NPIPA7E9PJI5 369 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms