RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 RGS6P49758 472 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 RAP1BP61224 184 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 RAP1AP62834 184 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 GLO1Q04760 184 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 SRYQ05066 204 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 HSF5Q4G112 596 aaPredicted RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 COX20Q5RI15 118 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ABHD17CQ6PCB6 329 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 SYNPOQ8N3V7 929 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 GDPD1Q8N9F7 314 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 TRMT10AQ8TBZ6 339 aaKnown RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 FAM46BQ96A09 425 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 NEURL3Q96EH8 262 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 SFXN2Q96NB2 322 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 RBM24Q9BX46 236 aaKnown RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 C12orf4Q9NQ89 552 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ASIC5Q9NY37 505 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 MRPL15Q9P015 296 aaKnown RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 NLKQ9UBE8 527 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 RNF215Q9Y6U7 377 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 PTTG1O95997 202 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 GPX2P18283 190 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 DAPP51397 102 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ZNF81P51508 661 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 NLGN4YQ8NFZ3 816 aaPredicted RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 AMDHD1Q96NU7 426 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 B3GNT3Q9Y2A9 372 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CENPBD1B2RD01 187 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 FAM227AF5H4B4 570 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 GFYI3L273 518 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 GASTP01350 101 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 ANXA3P12429 323 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 BCL6P41182 706 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.31
CDH3-201ENST00000264012 TSPAN31Q12999 210 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 OR7A5Q15622 319 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 GRK1Q15835 563 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 FAM71E1Q6IPT2 247 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 PYHIN1Q6K0P9 492 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 FTMTQ8N4E7 242 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 ATG4BQ9Y4P1 393 aa13.08□□□□□ -0.31
CDH3-201ENST00000264012 ANKRD28O15084 1053 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ZNF26P17031 533 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 PKLRP30613 574 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 MAGEA2P43356 314 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 GALNT6Q8NCL4 622 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ELSPBP1Q96BH3 223 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 INIPQ9NRY2 104 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ZNF337Q9Y3M9 751 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 NUP205Q92621 2012 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 MEGF11A6BM72 1044 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 SYT7O43581 403 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 DCAF7P61962 342 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 GPR148Q8TDV2 347 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 BORCS8Q96FH0 119 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ALG5Q9Y673 324 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 I6L893 689 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 SULT2B1O00204 365 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 ZNF16P17020 682 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 TPMTP51580 245 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 MALLQ13021 153 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 PDE7AQ13946 482 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 Q6ZNB5 142 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 LMF1Q96S06 567 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 EGLN3Q9H6Z9 239 aa13.08□□□□□ -0.32
CDH3-201ENST00000264012 AK6Q9Y3D8 172 aaKnown RBP13.08□□□□□ -0.32
CDH3-201ENST00000264012 ACOT7O00154 380 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 RAD1O60671 282 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ZNF28P17035 718 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 AMY2BP19961 511 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 PITPNBP48739 271 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 MAN2A2P49641 1150 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 HAVCR2Q8TDQ0 301 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 INTS14Q96SY0 518 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 CDK5RAP2Q96SN8 1893 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 TSPAN4O14817 238 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 VNN2O95498 520 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ADPRHP54922 357 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ZP2Q05996 745 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 LRRC37A5PQ49AS3 106 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms