RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 GSTM3P21266 225 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 EVI2BP34910 448 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 RYKP34925 604 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 DLSTP36957 453 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 COPZ1P61923 177 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 DESI1Q6ICB0 168 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 ZER1Q7Z7L7 766 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 GNPDA2Q8TDQ7 276 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 TMEM255BQ8WV15 326 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 TMCO6Q96DC7 493 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 HRASLS5Q96KN8 279 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 APOL4Q9BPW4 351 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 PRSS27Q9BQR3 290 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 LAT2Q9GZY6 243 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 ING2Q9H160 280 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF696Q9H7X3 374 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 RPS6KB2Q9UBS0 482 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 TERTO14746 1132 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 NDUFB5O43674 189 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 EIF4E2O60573 245 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 OSMP13725 252 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 EPHA2P29317 976 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 NOVA1P51513 510 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 RPP38P78345 283 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 TTC33Q6PID6 262 aaPredicted RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 NUP54Q7Z3B4 507 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 RNF113BQ8IZP6 322 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 GALNT15Q8N3T1 639 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 MPP4Q96JB8 637 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 HS6ST2Q96MM7 605 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
VAMP7-201ENST00000262640 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 REV1Q9UBZ9 1251 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 SCOCQ9UIL1 159 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 MYRFQ9Y2G1 1151 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 CARD8Q9Y2G2 431 aa11.93□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF354AO60765 605 aaPredicted RBP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 HPP00738 406 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 LINGO3P0C6S8 592 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ICAM2P13598 275 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 RBMS1P29558 406 aaKnown RBP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 SLC6A8P48029 635 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 RAPSNQ13702 412 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ULK3Q6PHR2 472 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 MARCH3Q86UD3 253 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 CADM2Q8N3J6 435 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 TMCO5AQ8N6Q1 288 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 GRHL3Q8TE85 626 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 DNAJA4Q8WW22 397 aaPredicted RBP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 TMEM239Q8WW34 195 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 TTC9Q92623 222 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 HGDQ93099 445 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 OIP5O43482 229 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 OR2J2O76002 312 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 OMPP47874 163 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 CRISP1P54107 249 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 NUP107P57740 925 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 FBXW4P57775 412 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 LSM11P83369 360 aaKnown RBP eCLIP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ALDH6A1Q02252 535 aaKnown RBP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 LYPD8Q6UX82 237 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 MISPQ8IVT2 679 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 NRMQ8IXM6 262 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ADAMTS14Q8WXS8 1223 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 ARSGQ96EG1 525 aa11.92□□□□□ -0.5
VAMP7-201ENST00000262640 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
VAMP7-201ENST00000262640 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 LOC101059948A0A1B0GTJ6 334 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 EIF4E1BA6NMX2 242 aaKnown RBP11.91□□□□□ -0.5
VAMP7-201ENST00000262640 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.91□□□□□ -0.5
VAMP7-201ENST00000262640 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CELA2AP08217 269 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 FPR3P25089 353 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 GGT2P36268 569 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 RBM34P42696 430 aaKnown RBP11.91□□□□□ -0.5
VAMP7-201ENST00000262640 GSSP48637 474 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CCR4P51679 360 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 ISL1P61371 349 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF117Q03924 483 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 TSPAN31Q12999 210 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 BLMHQ13867 455 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 ALG10BQ5I7T1 473 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 RAB43Q86YS6 212 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 RASL10BQ96S79 203 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CCNL2Q96S94 520 aaPredicted RBP11.91□□□□□ -0.5
VAMP7-201ENST00000262640 FBXL4Q9UKA2 621 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CDRT15L2A8MXV6 281 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 HCRTR2O43614 444 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 SCO2O43819 266 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 NTN1O95631 604 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 F8A1P23610 371 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms