RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 MINDY4Q4G0A6 757 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 RPS26P11Q5JNZ5 115 aaPredicted RBP12.17□□□□□ -0.46
SGCA-201ENST00000262018 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
SGCA-201ENST00000262018 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 FAM111BQ6SJ93 734 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 TBPL2Q6SJ96 375 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 TMEM205Q6UW68 189 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 C16orf58Q96GQ5 468 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 OR7D2Q96RA2 312 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 RBCK1Q9BYM8 510 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 LANCL2Q9NS86 450 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
SGCA-201ENST00000262018 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 C19orf53Q9UNZ5 99 aaPredicted RBP12.17□□□□□ -0.46
SGCA-201ENST00000262018 TLN2Q9Y4G6 2542 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 VPS13CQ709C8 3753 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 INAFM1C9JVW0 142 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 hCG_2039718K7EN88 272 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 CLDN4O14493 209 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 TFECO14948 347 aaPredicted RBP12.16□□□□□ -0.46
SGCA-201ENST00000262018 MAN1A2O60476 641 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 MFN2O95140 757 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 AGR2O95994 175 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 HPRP00739 348 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 LYNP07948 512 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 NR2F1P10589 423 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 CD247P20963 164 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 NT5EP21589 574 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 KIR2DL3P43628 341 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 CRISP3P54108 245 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 FUT5Q11128 374 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 DAG1Q14118 895 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 NHSL2Q5HYW2 709 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 MFSD12Q6NUT3 480 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 H3F3CQ6NXT2 135 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 QSOX2Q6ZRP7 698 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
SGCA-201ENST00000262018 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 GEMIN6Q8WXD5 167 aaKnown RBP12.16□□□□□ -0.46
SGCA-201ENST00000262018 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 ZNF607Q96SK3 696 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 YIPF4Q9BSR8 244 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 VN1R1Q9GZP7 353 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 ANKRA2Q9H9E1 313 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 PRTFDC1Q9NRG1 225 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 GIN1Q9NXP7 522 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 USE1Q9NZ43 259 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 BAG5Q9UL15 447 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 MMACHCQ9Y4U1 282 aa12.16□□□□□ -0.46
SGCA-201ENST00000262018 GPC6Q9Y625 555 aaPredicted RBP12.16□□□□□ -0.46
SGCA-201ENST00000262018 A0A0G2JPF8 293 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 SYNDIG1LA6NDD5 238 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 DUXAA6NLW8 204 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 RNF212BA8MTL3 300 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HNRNPCL2B2RXH8 293 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 G3V2T6 193 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 CDC123O75794 336 aaPredicted RBP12.15□□□□□ -0.46
SGCA-201ENST00000262018 NEURL1O76050 574 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HSD17B7P56937 341 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 RHAGQ02094 409 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 MAP4K2Q12851 820 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 BIKQ13323 160 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 PDK3Q15120 406 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
SGCA-201ENST00000262018 C6orf52Q5T4I8 152 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 PLAG1Q6DJT9 500 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HEPHL1Q6MZM0 1159 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 SHQ1Q6PI26 577 aaKnown RBP12.15□□□□□ -0.46
SGCA-201ENST00000262018 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 STK32CQ86UX6 486 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HIPK1Q86Z02 1210 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 SLC44A2Q8IWA5 706 aaPredicted RBP12.15□□□□□ -0.46
SGCA-201ENST00000262018 OR5M3Q8NGP4 307 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 RASSF5Q8WWW0 418 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 METTL21AQ8WXB1 218 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 NRBF2Q96F24 287 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 SLC35A4Q96G79 324 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 BTBD2Q9BX70 525 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 GABARAPL1Q9H0R8 117 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 VNN3Q9NY84 501 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 CALML5Q9NZT1 146 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 CLDN16Q9Y5I7 305 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
SGCA-201ENST00000262018 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.47
SGCA-201ENST00000262018 MYOCOSA0A1B0GUC4 107 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms