RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 FGF11Q92914 225 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 SLC41A3Q96GZ6 507 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 RBP7Q96R05 134 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 NIPAL2Q9H841 368 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 HEXA-AS1Q9H8Q6 139 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 NEUROD4Q9HD90 331 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 CXCL14O95715 111 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 DHFRP00374 187 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 IL9P15248 144 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TEAD1P28347 426 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 SOX2P48431 317 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 BTN3A2P78410 334 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 RAB33AQ14088 237 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 CRMP1Q14194 572 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 OR4C11Q6IEV9 310 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 KIAA1324Q6UXG2 1013 aaKnown RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 KLHDC8AQ8IYD2 350 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 CPXM2Q8N436 756 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 KREMEN2Q8NCW0 462 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 CXorf40BQ96DE9 158 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 LRIG1Q96JA1 1093 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TIMP4Q99727 224 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 GPR171O14626 319 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ARPC1BO15143 372 aaKnown RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 LDB3O75112 727 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 OLFM2O95897 454 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 RAF1P04049 648 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACADMP11310 421 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ANXA3P12429 323 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 AHCYP23526 432 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 NTSP30990 170 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 FXYD6P3P58550 94 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 GRM7Q14831 915 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 NDUFAF6Q330K2 333 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 SLC36A2Q495M3 483 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACSM3Q53FZ2 586 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 YOD1Q5VVQ6 348 aaPredicted RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 GRASPQ7Z6J2 395 aaPredicted RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACBD7Q8N6N7 88 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 OR4K13Q8NH42 304 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 DNAJA4Q8WW22 397 aaPredicted RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 SLC6A17Q9H1V8 727 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 MBNL1Q9NR56 388 aaKnown RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 HCN3Q9P1Z3 774 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 MYEF2Q9P2K5 600 aaKnown RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 EXOSC1Q9Y3B2 195 aaKnown RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 PPIL1Q9Y3C6 166 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ZNF593O00488 134 aaPredicted RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 FMO6PO60774 539 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACADLP28330 430 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ACSL1P33121 698 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 RAD52P43351 418 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 CCR8P51685 355 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TEKQ02763 1124 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 PLA2G7Q13093 441 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 MS4A15Q8N5U1 240 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 OR51Q1Q8NH59 317 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 LGALS14Q8TCE9 139 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 RGMAQ96B86 450 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ELMOD3Q96FG2 381 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 PRO3102Q9H379 93 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 PRDM9Q9NQV7 894 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 KLHL42Q9P2K6 505 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 ZNF69Q9UC07 566 aa12.07□□□□□ -0.48
SNX1-201ENST00000261889 STK25O00506 426 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 THBS2P35442 1172 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 EFNB1P98172 346 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TRMT12Q53H54 448 aaKnown RBP12.06□□□□□ -0.48
SNX1-201ENST00000261889 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TPGS2Q68CL5 300 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TCEAL8Q8IYN2 117 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 FRMD1Q8N878 549 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 OR5M3Q8NGP4 307 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 FANK1Q8TC84 345 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 DIO2Q92813 273 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 BADQ92934 168 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 SLC35A4Q96G79 324 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 OR52A5Q9H2C5 316 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 ZMIZ1Q9ULJ6 1067 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 CA5BQ9Y2D0 317 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 SERTM1A2A2V5 107 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 MID1O15344 667 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 RASGRP1O95267 797 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TMIGD3P0DMS9 266 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms