RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 IL12BP29460 328 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 GIPRP48546 466 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 CLDN6P56747 220 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 RNF4P78317 190 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 PLCXD2Q0VAA5 305 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 ZBED5Q49AG3 693 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 CASP12Q6UXS9 341 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 RASSF6Q6ZTQ3 369 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 LSMEM1Q8N8F7 131 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 EDEM2Q9BV94 578 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 SEMA4CQ9C0C4 833 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 SLC35A3Q9Y2D2 325 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.54■□□□□ 0.88
SIX3-201ENST00000260653 CHP2O43745 196 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 ABCD3P28288 659 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 ACSM5Q6NUN0 579 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 C16orf87Q6PH81 154 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 KIRREL2Q6UWL6 708 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 FAM71CQ8NEG0 241 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 CMKLR1Q99788 373 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 TMEM165Q9HC07 324 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 ATP13A2Q9NQ11 1180 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 OIP5O43482 229 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 MPZL2O60487 215 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 PCMT1P22061 227 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 CSNK2BP67870 215 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 TEKQ02763 1124 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 ALG10BQ5I7T1 473 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 C16orf47Q6ZP98 133 aaPredicted RBP20.53■□□□□ 0.88
SIX3-201ENST00000260653 TEX47Q8TBZ9 253 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 PHOSPHO1Q8TCT1 267 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 MR1Q95460 341 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 OMA1Q96E52 524 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 DPH1Q9BZG8 443 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 PLCXD1Q9NUJ7 323 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 TVP23BQ9NYZ1 205 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 TSPAN2O60636 221 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 CBFA2T3O75081 653 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 MT-ND2P03891 347 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 KLK3P07288 261 aaPredicted RBP20.53■□□□□ 0.88
SIX3-201ENST00000260653 JUNBP17275 347 aaPredicted RBP20.53■□□□□ 0.88
SIX3-201ENST00000260653 TBXA2RP21731 343 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 CDK5Q00535 292 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 EMX1Q04741 257 aaPredicted RBP20.53■□□□□ 0.88
SIX3-201ENST00000260653 CLEC12AQ5QGZ9 265 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 SLC34A3Q8N130 599 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 RTN4RQ9BZR6 473 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 KRCC1Q9NPI7 259 aaPredicted RBP20.53■□□□□ 0.88
SIX3-201ENST00000260653 PSORS1C1Q9UIG5 152 aa20.53■□□□□ 0.88
SIX3-201ENST00000260653 OTOGLQ3ZCN5 2332 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 RGS10O43665 173 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 FUT1P19526 365 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 CBLN3Q6UW01 205 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 FAM198BQ6UWH4 519 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 CPEB2Q7Z5Q1 589 aaKnown RBP20.52■□□□□ 0.88
SIX3-201ENST00000260653 RNF113BQ8IZP6 322 aaKnown RBP20.52■□□□□ 0.88
SIX3-201ENST00000260653 C17orf47Q8NEP4 570 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 IPCEF1Q8WWN9 437 aaPredicted RBP20.52■□□□□ 0.88
SIX3-201ENST00000260653 HSPBAP1Q96EW2 488 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 CCNB1IP1Q9NPC3 277 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 MEPEQ9NQ76 525 aaPredicted RBP20.52■□□□□ 0.88
SIX3-201ENST00000260653 B3GALT1Q9Y5Z6 326 aa20.52■□□□□ 0.88
SIX3-201ENST00000260653 RFPL3O75679 317 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 UBL4AP11441 157 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 IFI30P13284 250 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 MAKP20794 623 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 ADH7P40394 386 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 ETV5P41161 510 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 STAT5AP42229 794 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 MAP2K4P45985 399 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 SPEM2Q0P670 501 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 SKP2Q13309 424 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 TMEM205Q6UW68 189 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 HSDL2Q6YN16 418 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 ZNF620Q6ZNG0 422 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 TCEANCQ8N8B7 351 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 SUMF1Q8NBK3 374 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 THAP3Q8WTV1 239 aaPredicted RBP20.52■□□□□ 0.87
SIX3-201ENST00000260653 LPAR4Q99677 370 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 COPS4Q9BT78 406 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 LHPPQ9H008 270 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 WDR54Q9H977 334 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 GPR83Q9NYM4 423 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 IL20RAQ9UHF4 553 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 CARD8Q9Y2G2 431 aa20.52■□□□□ 0.87
SIX3-201ENST00000260653 SNRPGP62308 76 aaKnown RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 OIT3Q8WWZ8 545 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 GGHQ92820 318 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 NMD3Q96D46 503 aaKnown RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 LRFN5Q96NI6 719 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 SIGLEC11Q96RL6 698 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 RPS6KB2Q9UBS0 482 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 GPN3Q9UHW5 284 aaPredicted RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 PPIEQ9UNP9 301 aaKnown RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 LOXL2Q9Y4K0 774 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 PMS2P1A4D2B8 440 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 CLCA1A8K7I4 914 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 B4E171 279 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 PRKYO43930 277 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 NGFRP08138 427 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms