RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZBTB37Q5TC79 503 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 OR2L2Q8NH16 312 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 VOPP1Q96AW1 172 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 INSM2Q96T92 566 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 MGAT4CQ9UBM8 478 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 IDSB3KWA1 339 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ARPC5O15511 151 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SLC19A2O60779 497 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 HPXP02790 462 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ADH5P11766 374 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 RPS27P42677 84 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SEC13P55735 322 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ELOAQ14241 798 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 FGL2Q14314 439 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 EXOSC7Q15024 291 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 TEX261Q6UWH6 196 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 GET4Q7L5D6 327 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 FBXL6Q8N531 539 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 OR8S1Q8NH09 359 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 APOBEC4Q8WW27 367 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PAWRQ96IZ0 340 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 FOXN4Q96NZ1 517 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 GTPBP2Q9BX10 602 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SLC38A1Q9H2H9 487 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 NFKBIL1Q9UBC1 381 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF346Q9UL40 294 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 CBLCQ9ULV8 474 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 POLHQ9Y253 713 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 U3KQ87 197 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 LRIT2A6NDA9 550 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 RPN2P04844 631 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 CSN2P05814 226 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 EPCAMP16422 314 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 HIST1H1TP22492 207 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 LCN1P31025 176 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 BLVRAP53004 296 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PRMT2P55345 433 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 MAZP56270 477 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PER3P56645 1201 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ST3GAL2Q16842 350 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PARGQ86W56 976 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 COX18Q8N8Q8 333 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 ERMAPQ96PL5 475 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 MBNL1Q9NR56 388 aaKnown RBP11.14□□□□□ -0.63
USHBP1-201ENST00000252597 STARD5Q9NSY2 213 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 PPIL1Q9Y3C6 166 aa11.14□□□□□ -0.63
USHBP1-201ENST00000252597 TRBV2A0A0J9YWF9 115 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 UNC119BA6NIH7 251 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 C4orf51C9J302 202 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 HMGN1P05114 100 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 AHCYP23526 432 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 PCBP4P57723 403 aaKnown RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 C21orf58P58505 322 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 GNA13Q14344 377 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 ATXN7L3Q14CW9 347 aaPredicted RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 PUS10Q3MIT2 529 aaKnown RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 TRMT12Q53H54 448 aaKnown RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 LCTLQ6UWM7 567 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 OAFQ86UD1 273 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 OR5M3Q8NGP4 307 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 SLC35A4Q96G79 324 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 CAMK1GQ96NX5 476 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 PIGUQ9H490 435 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 SYNPO2LQ9H987 977 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 CA5BQ9Y2D0 317 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 A8MVJ9 347 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 STK25O00506 426 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 IMPA2O14732 288 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 DNAJB6O75190 326 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 OLFM2O95897 454 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 WNT1P04628 370 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 ANKRD34CP0C6C1 535 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 HK1P19367 917 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 GRK1Q15835 563 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 LRRC37A5PQ49AS3 106 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 LRRC28Q86X40 367 aaPredicted RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF761Q86XN6 746 aaPredicted RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 DNAAF1Q8NEP3 725 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 SETD7Q8WTS6 366 aaKnown RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 LMLNQ96KR4 655 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 MRGPRX3Q96LB0 322 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 OR52A5Q9H2C5 316 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms