RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 KLHDC9Q8NEP7 349 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 DDOQ99489 341 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 SGK494L7N484 410 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 SYN3O14994 580 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MAGEB1P43366 347 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF534Q76KX8 674 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 NANPQ8TBE9 248 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ZNF300Q96RE9 604 aaPredicted RBP7.08□□□□□ -1.28
RIF1-201ENST00000243326 RLIMQ9NVW2 624 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ICKQ9UPZ9 632 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 ENPP4Q9Y6X5 453 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 TNCP24821 2201 aa7.08□□□□□ -1.28
RIF1-201ENST00000243326 LILRB3O75022 631 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 FZD7O75084 574 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 OR13C7P0DN81 318 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 FOSL1P15407 271 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZNF91Q05481 1191 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 USP53Q70EK8 1073 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TAS1R1Q7RTX1 841 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SPRED1Q7Z699 444 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 DCUN1D3Q8IWE4 304 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 IL17RCQ8NAC3 791 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ABHD5Q8WTS1 349 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 PTDSS2Q9BVG9 487 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 GABRPO00591 440 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 CSO75390 466 aaKnown RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 SERPINA7P05543 415 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 GDPD1Q8N9F7 314 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZNF454Q8N9F8 522 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 FAM230AA0A1W2PPH8 454 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 C2orf72A6NCS6 295 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 RAD52P43351 418 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TAP2Q03519 686 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TCEAL1Q15170 157 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 C14orf28Q4W4Y0 310 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ALG10BQ5I7T1 473 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 EEF1A1P5Q5VTE0 462 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 HSD11B1LQ7Z5J1 315 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 NEIL2Q969S2 332 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 LRRC46Q96FV0 321 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 KCNIP3Q9Y2W7 256 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 OTOGLQ3ZCN5 2332 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 PMP2P02689 132 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 PRRT2Q7Z6L0 340 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 TMEM25Q86YD3 366 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZFPM2Q8WW38 1151 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SLC34A2O95436 690 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ITGAMP11215 1152 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 GP2P55259 537 aaKnown RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 TAS2R38P59533 333 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 HACD2Q6Y1H2 254 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 LARP4Q71RC2 724 aaKnown RBP eCLIP7.07□□□□□ -1.285e-9■■■■□ 24.4
RIF1-201ENST00000243326 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SLC9B1P1A6NJY1 282 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 HOXD8P13378 290 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 EIF2DP41214 584 aaKnown RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 PRICKLE2Q7Z3G6 844 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 LRRC18Q8N456 261 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZNF709Q8N972 641 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ARHGAP39Q9C0H5 1083 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 DKKL1Q9UK85 242 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SLC6A5Q9Y345 797 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 NPIPB15A6NHN6 443 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 TRIM64BA6NI03 449 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 GPR37L1O60883 481 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TMEM205Q6UW68 189 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 C15orf39Q6ZRI6 1047 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 DNAJC22Q8N4W6 341 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 IL1F10Q8WWZ1 152 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SLCO4A1Q96BD0 722 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 HS6ST2Q96MM7 605 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TNFRSF12AQ9NP84 129 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 B3GNT3Q9Y2A9 372 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SNX11Q9Y5W9 270 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 H3BML4 177 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 GNMTQ14749 295 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 RSU1Q15404 277 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 RNLSQ5VYX0 342 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 OR4C11Q6IEV9 310 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 NATD1Q8N6N6 113 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 RHOXF1Q8NHV9 184 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 LIN37Q96GY3 246 aaPredicted RBP7.07□□□□□ -1.28
RIF1-201ENST00000243326 SLC38A1Q9H2H9 487 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 MSRAQ9UJ68 235 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 KDM3BQ7LBC6 1761 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 VIPR2P41587 438 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ZNF792Q3KQV3 632 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 AKR1C8PQ5T2L2 129 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 TMEM179BQ7Z7N9 219 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ANKLE1Q8NAG6 615 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 ARL11Q969Q4 196 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 OR6C6A6NF89 314 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 OR7A17O14581 309 aa7.07□□□□□ -1.28
RIF1-201ENST00000243326 SOX15O60248 233 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms