RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C14orf79Q96F83 325 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 NXF5Q9H1B4 397 aaKnown RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 IER3IP1Q9Y5U9 82 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 LATO43561 262 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 LILRB3O75022 631 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SIX6O95475 246 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 LCATP04180 440 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 IRF2P14316 349 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 IER5LQ5T953 404 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SDR9C7Q8NEX9 313 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 G3V2L1 256 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 NUDT21O43809 227 aaKnown RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 LTBQ06643 244 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 UBXN2BQ14CS0 331 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 FCN2Q15485 313 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 TMEM35AQ53FP2 167 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 BRICD5Q6PL45 260 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 OR6T1Q8NGN1 323 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 OR10R2Q8NGX6 335 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 LMX1AQ8TE12 382 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 APIPQ96GX9 242 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF778Q96MU6 729 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 UHRF2Q96PU4 802 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RNF32Q9H0A6 362 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FZD7O75084 574 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 OMGP23515 440 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 S100A11P31949 105 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 TLE4Q04727 773 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 HEPHL1Q6MZM0 1159 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FAM180BQ6P0A1 224 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 COMMD6Q7Z4G1 85 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 OSTM1Q86WC4 334 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 C2CD4CQ8TF44 421 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 GGHQ92820 318 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF286AQ9HBT8 521 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 EHFQ9NZC4 300 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 TYRP14679 529 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SFRP5Q5T4F7 317 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FCRLAQ7L513 359 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 MRPL38Q96DV4 380 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 EXO1Q9UQ84 846 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 OR1A2Q9Y585 309 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 A6NL46 340 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FAM72CH0Y354 149 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 J3QR89 54 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 CRABP1P29762 137 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SIM1P81133 766 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 HTR4Q13639 388 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 EXOSC6Q5RKV6 272 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FAM72AQ5TYM5 149 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FAM72DQ6L9T8 149 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FAM72BQ86X60 149 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SPTSSAQ969W0 71 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 CWH43Q9H720 699 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 SOCS6O14544 535 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 LALBAP00709 142 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 PNMTP11086 282 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 PCGF2P35227 344 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 NPBWR1P48145 328 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 WDR5P61964 334 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 CAMK2DQ13557 499 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF74Q16587 644 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 C18orf21Q32NC0 220 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 GKN2Q86XP6 184 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 OR5D14Q8NGL3 314 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 MARC2Q969Z3 335 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 FUBP1Q96AE4 644 aaKnown RBP13.05□□□□□ -0.32
TARDBP-201ENST00000240185 VAPAQ9P0L0 249 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 URGCP-MRPS24S4R325 110 aa13.05□□□□□ -0.32
TARDBP-201ENST00000240185 PEX10O60683 326 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 NCR1O76036 304 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF43P17038 809 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 FPGSQ05932 587 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 INCA1Q0VD86 236 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
TARDBP-201ENST00000240185 Q6ZNX1 250 aa13.04□□□□□ -0.32
TARDBP-201ENST00000240185 GTF2H5Q6ZYL4 71 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms