RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
NEK9-201ENST00000238616 MAP2K3P46734 347 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 SOX9P48436 509 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 BEX5Q5H9J7 111 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 PLD6Q8N2A8 252 aaKnown RBP12.46□□□□□ -0.41
NEK9-201ENST00000238616 HES7Q9BYE0 225 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 STEAP1Q9UHE8 339 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 BCAT2O15382 392 aaPredicted RBP12.46□□□□□ -0.41
NEK9-201ENST00000238616 NUDT7P0C024 238 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 CNOT9Q92600 299 aaKnown RBP12.46□□□□□ -0.41
NEK9-201ENST00000238616 CDK1P06493 297 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 CA3P07451 260 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 OR10J4P0C629 311 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 MAGEB1P43366 347 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 BMXP51813 675 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 UBE2G2P60604 165 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 PIP5KL1Q5T9C9 394 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 ZNF767PQ75MW2 155 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 PDZD9Q8IXQ8 264 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 SGK3Q96BR1 496 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 GPR22Q99680 433 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 MYLKQ15746 1914 aa12.46□□□□□ -0.41
NEK9-201ENST00000238616 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 GYPBP06028 91 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.42
NEK9-201ENST00000238616 DCAF12L1Q5VU92 463 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 COMMD7Q86VX2 200 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 TMEM104Q8NE00 496 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 OR8J1Q8NGP2 316 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 OR6C1Q96RD1 312 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 WIF1Q9Y5W5 379 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 FREM3P0C091 2139 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.42
NEK9-201ENST00000238616 K7ERQ8 282 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 SLC22A5O76082 557 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 PRPS1P60891 318 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 SPHARQ15513 63 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 TMEM25Q86YD3 366 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 MUS81Q96NY9 551 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 DUSP23Q9BVJ7 150 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 ITGB4P16144 1822 aa12.46□□□□□ -0.42
NEK9-201ENST00000238616 A0A096LPI6 279 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 SCAMP2O15127 329 aaKnown RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 ZNF468Q5VIY5 522 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 OGFOD3Q6PK18 319 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 LINC00696Q6ZRV3 163 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 PAPD5Q8NDF8 572 aaKnown RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 OR4A16Q8NH70 328 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 TUBA1CQ9BQE3 449 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 SLC6A14Q9UN76 642 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 TRIOBPQ9H2D6 2365 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ARSFP54793 590 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 SDR9C7Q8NEX9 313 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 IGSF21Q96ID5 467 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 DHRS9Q9BPW9 319 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 IQCF3P0C7M6 154 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ERVK-25P63136 954 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ZP2Q05996 745 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ZNF181Q2M3W8 571 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 OR52E8Q6IFG1 317 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 FAM198BQ6UWH4 519 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ZNF836Q6ZNA1 936 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 TSPAN33Q86UF1 283 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 TOE1Q96GM8 510 aaKnown RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 BMFQ96LC9 184 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 ATG4BQ9Y4P1 393 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 P2RY2P41231 377 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 EMP2P54851 167 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 CNN3Q15417 329 aaKnown RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 SKA3Q8IX90 412 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 NKX1-2Q9UD57 310 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 A0A1W2PQL4 384 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 DOC2AQ14183 400 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 NRMQ8IXM6 262 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 UPRTQ96BW1 309 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 MACROD1Q9BQ69 325 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 INPP5KQ9BT40 448 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 WRAP73Q9P2S5 460 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 MPDZO75970 2070 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 PSMB10P40306 273 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms