RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SELENOVP59797 346 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR1S1Q8NH92 325 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 ISL2Q96A47 359 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 SLC25A46Q96AG3 418 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 PDLIM5Q96HC4 596 aaKnown RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 SORCS2Q96PQ0 1159 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 PITX2Q99697 317 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 IGFLR1Q9H665 355 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 ZNF223Q9UK11 482 aaPredicted RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 PLEKHM1Q9Y4G2 1056 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 A0A1B0GV50 99 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR5K4A6NMS3 321 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 B4GALT2O60909 372 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 GBX1Q14549 363 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 GGTA1PQ4G0N0 100 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 NPWQ8N729 165 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR4E2Q8NGC2 313 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR52N1Q8NH53 320 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 A0A087WZY1 265 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 PEX10O60683 326 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 HEXBP07686 556 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 C22orf15Q8WYQ4 148 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 DKKL1Q9UK85 242 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR1A2Q9Y585 309 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 NPIPA2E9PIF3 369 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 NPIPA3F8WFD2 350 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 IL1RNP18510 177 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 NFYBP25208 207 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 GRPRP30550 384 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 PIN1Q13526 163 aaPredicted RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 CD163Q86VB7 1156 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 SERINC5Q86VE9 423 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 OR51T1Q8NGJ9 327 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 APIPQ96GX9 242 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 BTBD2Q9BX70 525 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 MCOLN1Q9GZU1 580 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 ARNT2Q9HBZ2 717 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 ASXL3Q9C0F0 2248 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 C11orf98E9PRG8 122 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 DPM1O60762 260 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 HLA-HP01893 362 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 PSAPL1Q6NUJ1 521 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 LYPD4Q6UWN0 246 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 TM9SF4Q92544 642 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 GKN1Q9NS71 199 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 H7C1Q1 480 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 RGS11O94810 467 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 NR0B1P51843 470 aaKnown RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 ZNF266Q14584 549 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 SFXN4Q6P4A7 337 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 Q6ZVL8 140 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 GPR155Q7Z3F1 870 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 CELF5Q8N6W0 485 aaKnown RBP7.74□□□□□ -1.17
APOB-201ENST00000233242 IFT22Q9H7X7 185 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 MCCC2Q9HCC0 563 aa7.74□□□□□ -1.17
APOB-201ENST00000233242 LRIT2A6NDA9 550 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 IMPA1P29218 277 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 CD68P34810 354 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 HTRA4P83105 476 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 SEMG2Q02383 582 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SF3B4Q15427 424 aaKnown RBP eCLIP7.73□□□□□ -1.173e-7■■■■■ 38.8
APOB-201ENST00000233242 TAZQ16635 292 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 NAA11Q9BSU3 229 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 ACPTQ9BZG2 426 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 NKX6-2Q9C056 277 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 OR8D2Q9GZM6 311 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ACSS1Q9NUB1 689 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 MRPS17Q9Y2R5 130 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 PPP1R3DO95685 299 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 KDM4DQ6B0I6 523 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 TRMT2BQ96GJ1 504 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 DMRT3Q9NQL9 472 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 VSTM2BA6NLU5 285 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 D6RAR5 112 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 TMEM127O75204 238 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 HOXA9P31269 272 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SLC6A8P48029 635 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 THBS3P49746 956 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 LTBQ06643 244 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF551Q7Z340 670 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 TMEM239Q8WW34 195 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 DNAJC5Q9H3Z4 198 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 HHLA1C9JL84 531 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 MOCOSQ96EN8 888 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 C4orf36Q96KX1 117 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF778Q96MU6 729 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 F2RL3Q96RI0 385 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PRTFDC1Q9NRG1 225 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 C1orf123Q9NWV4 160 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SERTAD3Q9UJW9 196 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 OSGIN1Q9UJX0 560 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SLC6A14Q9UN76 642 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SLC35A3Q9Y2D2 325 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 LDB2O43679 373 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 GALTP07902 379 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 MAOBP27338 520 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 OPRD1P41143 372 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms