RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 KLHL15Q96M94 604 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
GPN3-201ENST00000228827 NDRG3Q9UGV2 375 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
GPN3-201ENST00000228827 ICAM5Q9UMF0 924 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 PROCRQ9UNN8 238 aa12.76□□□□□ -0.37
GPN3-201ENST00000228827 SERINC4A6NH21 518 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ZNF195O14628 629 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 CASKO14936 926 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 STX11O75558 287 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 AK1P00568 194 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 CGAP01215 116 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 C1QCP02747 245 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 UBL4AP11441 157 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 POU2F1P14859 743 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 CD79BP40259 229 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 EIF1P41567 113 aaKnown RBP12.75□□□□□ -0.37
GPN3-201ENST00000228827 OCRLQ01968 901 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 CASP8Q14790 479 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 EXOC3L2Q2M3D2 409 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 PDSS1Q5T2R2 415 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ATAD3BQ5T9A4 648 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ATG16L1Q676U5 607 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ESPNLQ6ZVH7 1005 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 GPR119Q8TDV5 335 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 TLCD1Q96CP7 247 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 MARK4Q96L34 752 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 SLC35A5Q9BS91 424 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 EXD2Q9NVH0 621 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ST6GALNAC2Q9UJ37 374 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 PLEKHA6Q9Y2H5 1048 aa12.75□□□□□ -0.37
GPN3-201ENST00000228827 ADAMDEC1O15204 470 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 ZNF264O43296 627 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 EFNA2O43921 213 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 CD8BP10966 210 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 ELK4P28324 431 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 SUMO3P55854 103 aaPredicted RBP12.74□□□□□ -0.37
GPN3-201ENST00000228827 CTBP2P56545 445 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 CARD18P57730 90 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 GUSBP1Q15486 140 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 SLC9B1Q4ZJI4 515 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 HMGN2P46Q86SG4 172 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 TOR1AIP2Q8NFQ8 470 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 OR5W2Q8NH69 310 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 ZNF524Q96C55 264 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 CCDC115Q96NT0 180 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 NMUR2Q9GZQ4 415 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
GPN3-201ENST00000228827 EMC9Q9Y3B6 208 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
GPN3-201ENST00000228827 EIF4E2O60573 245 aaKnown RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 UGT2B17O75795 530 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 GSNP06396 782 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 UBTFL6P0CB48 400 aaPredicted RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 PRKCAP17252 672 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 DNASE1P24855 282 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 CCKARP32238 428 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 KHKP50053 298 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 SLC18A1P54219 525 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 FUT5Q11128 374 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 CBFBQ13951 182 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 FGFBP1Q14512 234 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 QPRTQ15274 297 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 ZNF141Q15928 474 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 MAPK14Q16539 360 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 GPAT3Q53EU6 434 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 ZNF550Q7Z398 422 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 OR6K3Q8NGY3 331 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 NEURL3Q96EH8 262 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 OR52E6Q96RD3 313 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 PANX1Q96RD7 426 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 ZBTB18Q99592 522 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 INPP5KQ9BT40 448 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 THUMPD3Q9BV44 507 aaKnown RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 SRXN1Q9BYN0 137 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 KLHL4Q9C0H6 718 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
GPN3-201ENST00000228827 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
GPN3-201ENST00000228827 CCDC154A6NI56 674 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms