RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF681Q96N22 645 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 FERD3LQ96RJ6 166 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 INSM2Q96T92 566 aaPredicted RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 GSDMCQ9BYG8 508 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 SLC6A20Q9NP91 592 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 DIABLOQ9NR28 239 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 DLL4Q9NR61 685 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 PLEKHM1Q9Y4G2 1056 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 OR1A2Q9Y585 309 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 SPEGQ15772 3267 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 CDHR4A6H8M9 788 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF593O00488 134 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 EMC8O43402 210 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 PLPP2O43688 288 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SC5DO75845 299 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 RHOP08100 348 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 GALP22466 123 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 RPS7P62081 194 aaKnown RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 BDH1Q02338 343 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF85Q03923 595 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SNTA1Q13424 505 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZIC1Q15915 447 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ACSM3Q53FZ2 586 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 PYHIN1Q6K0P9 492 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SLC48A1Q6P1K1 146 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF836Q6ZNA1 936 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 PXKQ7Z7A4 578 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ARL14Q8N4G2 192 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF527Q8NB42 609 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR56A1Q8NGH5 318 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SFXN5Q8TD22 340 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 GHSRQ92847 366 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 WDR89Q96FK6 387 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 TEAD3Q99594 435 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 TRIM36Q9NQ86 728 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SIDT1Q9NXL6 827 aaKnown RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 APOBEC3BQ9UH17 382 aaKnown RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF443Q9Y2A4 671 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 TRPM6Q9BX84 2022 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 NPIPA5A0A0B4J1W7 369 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR52A4PA6NMU1 304 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 NPIPA7E9PJI5 369 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 GMDSO60547 372 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 DNAJB6O75190 326 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR7A10O76100 309 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 PRNPP04156 253 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 NPIPA8P0DM63 369 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SULT1A3P0DMM9 295 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SULT1A4P0DMN0 295 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 LAG3P18627 525 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 CSNK2A2P19784 350 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 PRKAR1BP31321 381 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 BMP8BP34820 402 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 TRA2BP62995 288 aaKnown RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 PUDPQ08623 228 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 SFRP4Q6FHJ7 346 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 BHLHB9Q6PI77 547 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF765Q7L2R6 523 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 BMP8AQ7Z5Y6 402 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR4N5Q8IXE1 308 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR13C2Q8NGS9 318 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 FANK1Q8TC84 345 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 OR2M2Q96R28 347 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 C1QTNF7Q9BXJ2 289 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
NUP88-201ENST00000225696 FBXO34Q9NWN3 711 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.51□□□□□ -0.57
NUP88-201ENST00000225696 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
NUP88-201ENST00000225696 TRAV27A0A087WT01 109 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 IGLON5A6NGN9 336 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 UNC119BA6NIH7 251 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 HMGN1P05114 100 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PEPDP12955 493 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 F8A1P23610 371 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 DNASE1P24855 282 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PYCR1P32322 319 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ERVFC1P60507 584 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ERVK-21P61565 698 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SIM1P81133 766 aaPredicted RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 PRR5P85299 388 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SHC2P98077 582 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 CDK3Q00526 305 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 RPL6Q02878 288 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 AANATQ16613 207 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 FNDC3BQ53EP0 1204 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 Q6ZTK2 550 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ERN2Q76MJ5 926 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms