RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 UCKL1Q9NWZ5 548 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 TSC2P49815 1807 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 LOC105369274A0A096LPK9 316 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 LOC102723532A0A0G2JNH3 316 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 FFAR1O14842 300 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 PPM1BO75688 479 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 FPR3P25089 353 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 AP3S2P59780 193 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 TEKQ02763 1124 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 CD300CQ08708 224 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 CRMP1Q14194 572 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 OR4N4Q8N0Y3 316 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 MS4A15Q8N5U1 240 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 OR13H1Q8NG92 308 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 NSMAFQ92636 917 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 EFHD2Q96C19 240 aaPredicted RBP11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 CNN2Q99439 309 aaKnown RBP11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 SDF2Q99470 211 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 SIRT3Q9NTG7 399 aaPredicted RBP11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 RASD1Q9Y272 281 aa11.51□□□□□ -0.57
TM9SF4-201ENST00000217315 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 OR2B3O76000 313 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 APBB3O95704 486 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PROS1P07225 676 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 CASP3P42574 277 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 MTFR2Q6P444 385 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 GDPD3Q7L5L3 318 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 TIGD4Q8IY51 512 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 NKD1Q969G9 470 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 COX14Q96I36 57 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 TNFRSF13CQ96RJ3 184 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 MRPL15Q9P015 296 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 LAMP5Q9UJQ1 280 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 KIR2DS5A0A0G2JLQ3 304 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 A0A0G2JNG1 304 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 ZC3H12DA2A288 527 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 KIR2DS3K7RE56 304 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 GCM2O75603 506 aaPredicted RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 CD2P06729 351 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 TGFBR2P37173 567 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 MVDP53602 400 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 KIR2DS5Q14953 304 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 ACSM3Q53FZ2 586 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 C1orf94Q6P1W5 598 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 TRMT10AQ8TBZ6 339 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 ZNF486Q96H40 463 aaPredicted RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 CENPMQ9NSP4 180 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 SLC35A3Q9Y2D2 325 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 AK6Q9Y3D8 172 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PCYT1BQ9Y5K3 369 aaPredicted RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 A0A1W2PS29 197 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 HTR3EA5X5Y0 456 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 ARRDC5A6NEK1 342 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 LINC01565O15544 149 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 SCO2O43819 266 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 GSTT2P0CG29 244 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 GSTT2BP0CG30 244 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PSMB10P40306 273 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 TSFMP43897 325 aaKnown RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 NTRK2Q16620 822 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 ZNF836Q6ZNA1 936 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PRR22Q8IZ63 422 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 THAP3Q8WTV1 239 aaPredicted RBP11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
TM9SF4-201ENST00000217315 CPED1A4D0V7 1026 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 PRAMEF2O60811 474 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 ADAM23O75077 832 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 ZNF823P16415 610 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 GRK5P34947 590 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 TPMTP51580 245 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 CTXN1P60606 82 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 ERVK-25P63136 954 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 LEG1Q6P5S2 330 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 SLC29A4Q7RTT9 530 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 CLDN22Q8N7P3 220 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 PFN4Q8NHR9 129 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 THAP4Q8WY91 577 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 ACOT12Q8WYK0 555 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 CNOT9Q92600 299 aaKnown RBP11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 POT1Q9NUX5 634 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 CD207Q9UJ71 328 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 MRPS17Q9Y2R5 130 aaKnown RBP11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 ASB4Q9Y574 426 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 PCDHGA3Q9Y5H0 932 aa11.49□□□□□ -0.57
TM9SF4-201ENST00000217315 FGF17O60258 216 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms