RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 ARSBP15848 533 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 CTHP32929 405 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 APLNRP35414 380 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 AQP2P41181 271 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 CSNK1A1P48729 337 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 MARCH8Q5T0T0 291 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 WBP2NLQ6ICG8 309 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 PODNL1Q6PEZ8 512 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 PRR22Q8IZ63 422 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 FGF13Q92913 245 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 TXNDC15Q96J42 360 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 EGLN2Q96KS0 407 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 SGCZQ96LD1 299 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 ADOQ96SZ5 270 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 TRIM64BA6NI03 449 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 LDB3O75112 727 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 F3P13726 295 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 CPMP14384 443 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 CLDN2P57739 230 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 EMX1Q04741 257 aaPredicted RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 IRF4Q15306 451 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 GGTA1PQ4G0N0 100 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 TRAPPC6BQ86SZ2 158 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 NLGN4YQ8NFZ3 816 aaPredicted RBP12.73□□□□□ -0.37
SF3A1-201ENST00000215793 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 CPNE7Q9UBL6 633 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 ATPIF1Q9UII2 106 aa12.73□□□□□ -0.37
SF3A1-201ENST00000215793 LOC102725191A0A1B0GVB3 256 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ATXN1LP0C7T5 689 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 BMP4P12644 408 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 GIPRP48546 466 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 MLLT11Q13015 90 aaPredicted RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 OR7A5Q15622 319 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SLC5A12Q1EHB4 618 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 PIP5KL1Q5T9C9 394 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 RNF128Q8TEB7 428 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 OR7D2Q96RA2 312 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NT5DC2Q9H857 520 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TESQ9UGI8 421 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 LOC102723532A0A0G2JNH3 316 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 PRSS38A1L453 326 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ARAFP10398 606 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 RGRP47804 291 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 FXYD4P59646 89 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ERVK-16P61578 105 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SNRPD2P62316 118 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CTBSQ01459 385 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ZNF691Q5VV52 312 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 RTL6Q6ICC9 239 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 IGFN1Q86VF2 1251 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 BRIX1Q8TDN6 353 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NAT6Q93015 286 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SLC39A13Q96H72 371 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TMEM100Q9NV29 134 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TVP23AA6NH52 213 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TMX2-CTNND1H3BSU7 103 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 IL1AP01583 271 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CRHBPP24387 322 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 GCH1P30793 250 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ADRA1AP35348 466 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CNN3Q15417 329 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 DEFB133Q30KQ1 61 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 PKDCCQ504Y2 493 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CGB2Q6NT52 195 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 METTL4Q8N3J2 472 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 POC1BQ8TC44 478 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 UBXN10Q96LJ8 280 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 DUSP23Q9BVJ7 150 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 HCAR1Q9BXC0 346 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NPIPA5A0A0B4J1W7 369 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NPIPA7E9PJI5 369 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 GPRIN2O60269 458 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 SRPX2O60687 465 aaPredicted RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NPIPA8P0DM63 369 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 GAAP10253 952 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TAS2R20P59543 309 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 KCNJ10P78508 379 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 CTSL3PQ5NE16 218 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 TSSK4Q6SA08 328 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 PIWIL3Q7Z3Z3 882 aaKnown RBP12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
SF3A1-201ENST00000215793 NRG4Q8WWG1 115 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms