RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 KHNYNO15037 678 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 CD9P21926 228 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PIGAP37287 484 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ETV5P41161 510 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 GZMKP49863 264 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ARSDP51689 593 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 P2RY14Q15391 338 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SLC35G1Q2M3R5 365 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 RAB6CQ53S08 254 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SOHLH1Q5JUK2 328 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 UBE2NLQ5JXB2 153 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ETFRF1Q6IPR1 90 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 KCNIP4Q6PIL6 250 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 FAM111BQ6SJ93 734 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 FIP1L1Q6UN15 594 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 SGPP2Q8IWX5 399 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 OR51L1Q8NGJ5 315 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PHOSPHO1Q8TCT1 267 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 GLYATL1Q969I3 302 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 RAB6CQ9H0N0 254 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 C20orf85Q9H1P6 137 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 KCNK6Q9Y257 313 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 C11orf98E9PRG8 122 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 TMX2-CTNND1H3BSU7 103 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 CPN1P15169 458 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SGSHP51688 502 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PSPHP78330 225 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 MEF2DQ14814 521 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ZNF805Q5CZA5 627 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SLC35F2Q8IXU6 374 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ZNF619Q8N2I2 560 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 IMP4Q96G21 291 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 APIPQ96GX9 242 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PTGES2Q9H7Z7 377 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 CFAP20Q9Y6A4 193 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 V9GY05 133 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 CCDC163A0A0D9SF12 145 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 HYKKA2RU49 373 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SYPP08247 313 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 SPNP16150 400 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 RPS19P39019 145 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 DUSP3P51452 185 aaPredicted RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 ELOCQ15369 112 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ERN2Q76MJ5 926 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 TPRA1Q86W33 373 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 TRAM1L1Q8N609 369 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SYT3Q9BQG1 590 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 SPNS1Q9H2V7 528 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 METTL7AQ9H8H3 244 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 BABAM2Q9NXR7 383 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 ZNF230Q9UIE0 474 aaPredicted RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 TRIM77I1YAP6 450 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 M0R3H8 397 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SERPINA7P05543 415 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 ZNF41P51814 821 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 NR0B1P51843 470 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 RIDAP52758 137 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 CDK3Q00526 305 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 UPP1Q16831 310 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 AAK1Q2M2I8 961 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 MEX3DQ86XN8 651 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 FRMD1Q8N878 549 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PLPP5Q8NEB5 264 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 RAB3CQ96E17 227 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SEC22CQ9BRL7 303 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 OR11A1Q9GZK7 315 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 FAM212BQ9NTI7 297 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 COL1A1P02452 1464 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 FAM221BA6H8Z2 402 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 A8MXE2 369 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SNAI1O95863 264 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 ACP2P11117 423 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SPI1P17947 270 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PREPP48147 710 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TAS2R19P59542 299 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TMEM115Q12893 351 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 EBPQ15125 230 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 C1orf220Q5T0J3 134 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SLC6A19Q695T7 634 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 HBMQ6B0K9 141 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 ZC3H14Q6PJT7 736 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 FCRLAQ7L513 359 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 NUP43Q8NFH3 380 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 KCTD12Q96CX2 325 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 RNF167Q9H6Y7 350 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PRODH2Q9UF12 536 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PLAGL1Q9UM63 463 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 RNF215Q9Y6U7 377 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TMEM82A0PJX8 343 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 OR5K4A6NMS3 321 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SOX1O00570 391 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 TSPAN6O43657 245 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SRPX2O60687 465 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 GALTP07902 379 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 BPIP17213 487 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SUOXP51687 545 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 RPS21P63220 83 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 ZNF789Q5FWF6 425 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms