RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 AKIRIN1Q9H9L7 192 aaPredicted RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 ERVK-18Q9QC07 812 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 PSORS1C1Q9UIG5 152 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 NXT1Q9UKK6 140 aaKnown RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 SH3D21A4FU49 640 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 B4E171 279 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 SCDO00767 359 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 CDC42EP2O14613 210 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 ICOSLGO75144 302 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 MT-ND2P03891 347 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 PTNP21246 168 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 ABCD3P28288 659 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 IL12BP29460 328 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 TSPAN7P41732 249 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 RBM34P42696 430 aaKnown RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 GIPRP48546 466 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 MASP1P48740 699 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 NUDT6P53370 316 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 RNF4P78317 190 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 PRKCDQ05655 676 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 GINS1Q14691 196 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 ALG10BQ5I7T1 473 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 PAPD4Q6PIY7 484 aaKnown RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 APOOLQ6UXV4 268 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 MRGPREQ86SM8 312 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 LSRQ86X29 649 aaPredicted RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 CLDN22Q8N7P3 220 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 OR8J1Q8NGP2 316 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 OR13F1Q8NGS4 319 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 PFN4Q8NHR9 129 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 MUL1Q969V5 352 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 MPP4Q96JB8 637 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 POLDIP3Q9BY77 421 aaKnown RBP14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 CCDC90BQ9GZT6 254 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 IL20Q9NYY1 176 aa14.34□□□□□ -0.11
LAPTM4A-201ENST00000175091 CCDC160A6NGH7 325 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 CLCA1A8K7I4 914 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 SEC14L2O76054 403 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 NGFRP08138 427 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 UBL4AP11441 157 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 HPGDP15428 266 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 SMSP52788 366 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 NUBP1P53384 320 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 EMX1Q04741 257 aaPredicted RBP14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 SLC27A4Q6P1M0 643 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 AMER2Q8N7J2 671 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 OMA1Q96E52 524 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 HS6ST2Q96MM7 605 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 CMKLR1Q99788 373 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 COPS4Q9BT78 406 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 EDEM2Q9BV94 578 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 ULBP3Q9BZM4 244 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 CXorf56Q9H5V9 222 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 C20orf141Q9NUB4 165 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 C19orf25Q9UFG5 118 aaPredicted RBP14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 RSL24D1Q9UHA3 163 aaKnown RBP14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 CDH10Q9Y6N8 788 aa14.33□□□□□ -0.12
LAPTM4A-201ENST00000175091 REM1O75628 298 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 PCYT1AP49585 367 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 PNLIPRP2P54317 469 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 CTBP2P56545 445 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 MVKQ03426 396 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 ACSM5Q6NUN0 579 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 ULK3Q6PHR2 472 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 LINC00114Q6XXX2 140 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 HSDL2Q6YN16 418 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 CPEB2Q7Z5Q1 589 aaKnown RBP14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 GATSQ8NAP1 163 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 NUBPLQ8TB37 319 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 FAR1Q8WVX9 515 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 FGF11Q92914 225 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 TP53INP1Q96A56 240 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 VMP1Q96GC9 406 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 LPAR4Q99677 370 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 DPH1Q9BZG8 443 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 LHPPQ9H008 270 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 AMBNQ9NP70 447 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 TMEM5Q9Y2B1 443 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 MED31Q9Y3C7 131 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 A0A1W2PQD3 144 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 KPNA4O00629 521 aaPredicted RBP14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 OIP5O43482 229 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 PRKYO43930 277 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 KLK3P07288 261 aaPredicted RBP14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 IFI30P13284 250 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 MAKP20794 623 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 EFNB1P98172 346 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 TUBA3CQ13748 450 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 TMPRSS11FQ6ZWK6 438 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 CLVS1Q8IUQ0 354 aaPredicted RBP14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 CADM2Q8N3J6 435 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 SVOPQ8N4V2 548 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 SUMF1Q8NBK3 374 aa14.32□□□□□ -0.12
LAPTM4A-201ENST00000175091 RNF217Q8TC41 542 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms