RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 NR4A1P22736 598 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 KRT20P35900 424 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ACAA2P42765 397 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MASP1P48740 699 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TCF15Q12870 199 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ISXQ2M1V0 245 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 KLHL26Q53HC5 615 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TMEM205Q6UW68 189 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF730Q6ZMV8 503 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CMIPQ8IY22 773 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TMEM255BQ8WV15 326 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MR1Q95460 341 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ADOQ96SZ5 270 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PRSS27Q9BQR3 290 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 EVA1AQ9H8M9 152 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 UBQLN4Q9NRR5 601 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PPIEQ9UNP9 301 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TO15178 435 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 INHBBP09529 407 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CRISP1P54107 249 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RNF4P78317 190 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 E2F1Q01094 437 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PAPD4Q6PIY7 484 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CD300LDQ6UXZ3 194 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LSRQ86X29 649 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 C17orf47Q8NEP4 570 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TOR1AIP2Q8NFQ8 470 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC35B4Q969S0 331 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 C8orf44Q96CB5 159 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CDC6Q99741 560 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 STRADBQ9C0K7 418 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PARD6AQ9NPB6 346 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TOR4AQ9NXH8 423 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SCN3BQ9NY72 215 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ENPP5Q9UJA9 477 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MRTO4Q9UKD2 239 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NXT1Q9UKK6 140 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZFHX2Q9C0A1 2572 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PMS2P1A4D2B8 440 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CSTAP01040 98 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TP53P04637 393 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 IDH2P48735 452 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SPCS2Q15005 226 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CSRP2Q16527 193 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZSWIM7Q19AV6 140 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 DCAF12Q5T6F0 453 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 DESI1Q6ICB0 168 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RAB11FIP2Q7L804 512 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CPEB2Q7Z5Q1 589 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ANKRD13BQ86YJ7 626 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF540Q8NDQ6 660 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FAM81AQ8TBF8 368 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LPAR4Q99677 370 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PLGRKTQ9HBL7 147 aa18.09■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZAR1LA6NP61 321 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MT-ND2P03891 347 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CYC1P08574 325 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 IGFBP1P08833 259 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ABCD3P28288 659 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RAB15P59190 212 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 COX10Q12887 443 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CTF1Q16619 201 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NDUFAF6Q330K2 333 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CDCP2Q5VXM1 449 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TMEM236Q5W0B7 351 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WDR88Q6ZMY6 472 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RRM2BQ7LG56 351 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MEX3DQ86XN8 651 aaKnown RBP18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GALNT6Q8NCL4 622 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SIGLEC11Q96RL6 698 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF559Q9BR84 538 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 HOXD1Q9GZZ0 328 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GPN3Q9UHW5 284 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RNF6Q9Y252 685 aa18.08■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LYPD3O95274 346 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 POU1F1P28069 291 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 OMPP47874 163 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 MLLT10P55197 1068 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FNDC7Q5VTL7 733 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 APOOLQ6UXV4 268 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PRICKLE2Q7Z3G6 844 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZBTB46Q86UZ6 589 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 NRMQ8IXM6 262 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF527Q8NB42 609 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 OIT3Q8WWZ8 545 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 HSPBAP1Q96EW2 488 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CNIH4Q9P003 139 aa18.08■□□□□ 0.48
TNFRSF1A-201ENST00000162749 A0A0B4J2E0 115 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 A0A1B0GX12 115 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 H3BN98 237 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TSPAN2O60636 221 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FAM20BO75063 409 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ICOSLGO75144 302 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 REM1O75628 298 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 KLF7O75840 302 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 UTS2O95399 124 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 BCL10O95999 233 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 HPGDP15428 266 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PTNP21246 168 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 IFNGR2P38484 337 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms