RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cd300ld3Q6SJQ5 245 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Scgb2b2Q6UGQ3 114 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mab21l2Q8BPP1 359 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Bend7Q8BSV3 434 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 PxkQ8BX57 582 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kctd20Q8CDD8 419 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gtf2f2Q8R0A0 249 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr283Q8VGU2 309 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr644Q8VH21 314 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cox4i2Q91W29 172 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MtapQ9CQ65 283 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Spcs2Q9CYN2 226 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cdc40Q9DC48 579 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Isoc2bQ9DCC7 210 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r69G3XA45 850 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 1700017D01RikG5E851 209 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm10338K7N692 204 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 PtgdsO09114 189 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 IlkO55222 452 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Aldh3a2P47740 484 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gng2P63213 71 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 VldlrP98156 873 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Grxcr2Q3TYR5 254 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hspb6Q5EBG6 162 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Orm3Q63805 206 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1115Q7TR53 326 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr128Q7TRJ1 308 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxo34Q80XI1 695 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gpr68Q8BFQ3 365 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc2a12Q8BFW9 622 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Txnl4bQ8BUH1 149 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nfatc4Q8K120 901 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mmgt2Q8R3L0 123 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Arl6ip5Q8R5J9 188 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gbgt1Q8VI38 347 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ces2cQ91WG0 561 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hrh4Q91ZY2 391 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Siglec5Q920G3 569 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 9530002B09RikQ9EPV7 135 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Chd5A2A8L1 1946 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NinQ61043 2035 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm5141A0A0J9YUW3 581 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp993A2A8V4 313 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp54E9PW05 585 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm7951E9Q0A2 213 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nr1h5E9Q5A6 505 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm6482F6YHC1 213 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm17124F6ZIG1 213 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp989H3BLB0 661 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm5849J3QPE5 117 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ArafP04627 604 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 St3gal3P97325 374 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rsu1Q01730 277 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Prr27Q3SYJ2 352 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pon2Q62086 354 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kyat3Q71RI9 455 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Trim46Q7TNM2 759 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Aifm2Q8BUE4 373 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gpr107Q8BUV8 551 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ReltQ8BX43 436 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Frmd6Q8C0V9 622 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Lancl3Q8CD19 420 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gabarapl1Q8R3R8 117 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc2a10Q8VHD6 536 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pot1Q91WC1 640 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Chmp1aQ921W0 196 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Psat1Q99K85 370 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gdpd3Q99LY2 330 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NepnQ9CQ76 512 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 PolmQ9JIW4 496 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm13539A0A1B0GSM6 183 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mterf1bB9EJ57 379 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 AldocP05063 363 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tcea1P10711 301 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ypel5P62700 121 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Klri2Q5DT36 248 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr290Q7TS13 315 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Acp6Q8BP40 418 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 B4gat1Q8BWP8 415 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nudt6Q8CH40 313 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ctxn1Q8K129 82 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem185bQ8R3R5 350 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gmpr2Q99L27 348 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cmtm3Q99LJ5 184 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc25a46Q9CQS4 418 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Phf6Q9D4J7 364 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr44Q9EQB8 314 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pcdhgb8A0A140LI48 931 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm21936A0A1Y7VJE9 144 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hpse2B2RY83 592 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc6a18O88576 615 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Agtr1aP29754 359 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Arpc4P59999 168 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 UbdP63072 162 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Galk2Q68FH4 458 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kctd12Q6WVG3 327 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr744Q7TRM0 323 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rnf38Q8BI21 518 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm9999Q8C5Y2 53 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kcnmb1Q8CAE3 191 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms