RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 A0A1W2PP55 124 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 BHLHE40O14503 412 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 HYAL3O43820 417 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 MRPL3P09001 348 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 CLUP10909 449 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 IL9P15248 144 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 CFL1P23528 166 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 PLA1AQ53H76 456 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 C17orf47Q8NEP4 570 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 OR5W2Q8NH69 310 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 C1QTNF2Q9BXJ5 285 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 THAP10Q9P2Z0 257 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 FBXL4Q9UKA2 621 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SDHBP21912 280 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 BTCP35070 178 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SIM1P81133 766 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 TJAP1Q5JTD0 557 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SIGIRRQ6IA17 410 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SDF2Q99470 211 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 SARGQ9BW04 601 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 GTPBP2Q9BX10 602 aaKnown RBP12.85□□□□□ -0.35
PHGDH-233ENST00000642021 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
PHGDH-233ENST00000642021 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 UNC119BA6NIH7 251 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF888P0CJ79 500 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 NOS3P29474 1203 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 EEF1A1P68104 462 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 ID2Q02363 134 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 SLC3A1Q07837 685 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 MAB21L1Q13394 359 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 RPE65Q16518 533 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 SLC25A35Q3KQZ1 300 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 HDDC3Q8N4P3 179 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 OR4E2Q8NGC2 313 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 BRIX1Q8TDN6 353 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 ACOT12Q8WYK0 555 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 HSD17B8Q92506 261 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 CREB3L1Q96BA8 519 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 AHCYL2Q96HN2 611 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 OR51V1Q9H2C8 321 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 A0A0G2JK05 382 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 SYNDIG1LA6NDD5 238 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 PRR19A6NJB7 356 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 EEF1E1O43324 174 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 EML2O95834 649 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 GALP22466 123 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 SLC16A1P53985 500 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 BDH1Q02338 343 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 FCN2Q15485 313 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 CST6Q15828 149 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 OAFQ86UD1 273 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 LRRC28Q86X40 367 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
PHGDH-233ENST00000642021 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 SLC23A1Q9UHI7 598 aa12.84□□□□□ -0.35
PHGDH-233ENST00000642021 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 BTN3A3O00478 584 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 PEX12O00623 359 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CDK2AP1O14519 115 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 FABP7O15540 132 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 IFI30P13284 250 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 ACVR1BP36896 505 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 GALEQ14376 348 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 MTSS1LQ765P7 747 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CEACAM19Q7Z692 300 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 SYT9Q86SS6 491 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 LRRC25Q8N386 305 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-233ENST00000642021 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms