RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	ASIC3	Q9UHC3	531 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	TEKT2	Q9UIF3	430 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	C3orf18	Q9UK00	162 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	FBXW2	Q9UKT8	454 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	STRAP	Q9Y3F4	350 aa	Known RBP	5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	NAALAD2	Q9Y3Q0	740 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	SHANK1	Q9Y566	2161 aa		5.78	□□□□□ -1.48
CASC19-238	ENST00000641523	PCM1	Q15154	2024 aa		5.77	□□□□□ -1.48
CASC19-238	ENST00000641523	LOC100509620	A0A075B734	347 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	KCNE1B	A0A087WTH5	132 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523		A0A0A0MQY5	61 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	NSG1	A0A0A6YYJ2	146 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SLC22A23	A1A5C7	686 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	FOXO6	A8MYZ6	492 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	TCP11X1	B4DZS4	312 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523		H0YIG0	161 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	GOLGA8M	H3BSY2	632 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	CCDC188	H7C350	402 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	KIF2A	O00139	706 aa	Predicted RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SOCS6	O14544	535 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	ANGPT2	O15123	496 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	HS6ST1	O60243	411 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	MITF	O75030	526 aa	Predicted RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	PLAU	P00749	431 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SERPINA7	P05543	415 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SLC35G6	P0C7Q6	338 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	TNFRSF1A	P19438	455 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	OR1D4	P47884	311 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	UQCRFS1	P47985	274 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	EMP2	P54851	167 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	AP1S2	P56377	157 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	KLC1	Q07866	573 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	MFAP5	Q13361	173 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	FASTK	Q14296	549 aa	Known RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	CCSMST1	Q4G0I0	132 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SPANXN3	Q5MJ09	141 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	FBXO42	Q6P3S6	717 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	PRSS45	Q7RTY3	260 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	C17orf64	Q86WR6	236 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	DENND6A	Q8IWF6	608 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	METTL27	Q8N6F8	245 aa	Predicted RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	PTPMT1	Q8WUK0	201 aa	Predicted RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	KAT2A	Q92830	837 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SLCO2A1	Q92959	643 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	ITFG2	Q969R8	447 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SARAF	Q96BY9	339 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SNRNP40	Q96DI7	357 aa	Known RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	THOC3	Q96J01	351 aa	Known RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	C10orf90	Q96M02	699 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	OR2A5	Q96R48	311 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	GPR21	Q99679	349 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	ZNF350	Q9GZX5	532 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	PARVB	Q9HBI1	364 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	FBXO6	Q9NRD1	293 aa	Predicted RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	C20orf141	Q9NUB4	165 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	TMEM184C	Q9NVA4	438 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	DNAJC11	Q9NVH1	559 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	HAO2	Q9NYQ3	351 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	PCYOX1	Q9UHG3	505 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SNX12	Q9UMY4	172 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	MAU2	Q9Y6X3	613 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	SPEN	Q96T58	3664 aa	Known RBP	5.77	□□□□□ -1.49
CASC19-238	ENST00000641523	HEATR5B	Q9P2D3	2071 aa		5.77	□□□□□ -1.49
CASC19-238	ENST00000641523		A0A087X1B8	175 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	TRAV17	A0A0B4J275	112 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ANKUB1	A6NFN9	424 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	IDS	B3KWA1	339 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	DNALI1	O14645	258 aa	Predicted RBP	5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	CYTIP	O60759	359 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	BMP10	O95393	424 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	NSA2	O95478	260 aa	Known RBP	5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	IL1A	P01583	271 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ABHD2	P08910	425 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	TCEA1	P23193	301 aa	Known RBP	5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	IMPA1	P29218	277 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	SLC26A3	P40879	764 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	PTH2R	P49190	550 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	F2RL1	P55085	397 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	KRTAP10-2	P60368	255 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	TBPL1	P62380	186 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ARG2	P78540	354 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	CUL1	Q13616	776 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	SGCB	Q16585	318 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	TMEM268	Q5VZI3	342 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ATG9B	Q674R7	924 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	CAPN13	Q6MZZ7	669 aa	Predicted RBP	5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	IL20RB	Q6UXL0	311 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	SHISA6	Q6ZSJ9	500 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	PIWIL4	Q7Z3Z4	852 aa	Known RBP	5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	CPNE9	Q8IYJ1	553 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	SLC35F6	Q8N357	371 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	KDM8	Q8N371	416 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	BCORP1	Q8N888	145 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ST6GALNAC3	Q8NDV1	305 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	C5orf30	Q96GV9	206 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	MS4A14	Q96JA4	679 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	YY1AP1	Q9H869	796 aa		5.76	□□□□□ -1.49
CASC19-238	ENST00000641523	ZNF160	Q9HCG1	818 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms