RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 G3V3Y1 287 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 ERVH48-1M5A8F1 160 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SYT5O00445 386 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GNB5O14775 395 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 PEX1O43933 1283 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 C8BP07358 591 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 PGCP20142 388 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 CD247P20963 164 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SUMO3P55854 103 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-218ENST00000641491 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GPR85P60893 370 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SELENOWP63302 87 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 KCNC4Q03721 635 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 KLHL26Q53HC5 615 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-218ENST00000641491 TMEM81Q6P7N7 255 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 LYPD8Q6UX82 237 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 ZAR1Q86SH2 424 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SLC22A16Q86VW1 577 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 AQP12AQ8IXF9 295 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 POGLUT1Q8NBL1 392 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 VANGL1Q8TAA9 524 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GRHL3Q8TE85 626 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 TAMM41Q96BW9 452 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 MFRPQ9BY79 579 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GALNT9Q9HCQ5 603 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
PHGDH-218ENST00000641491 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 TP53TG5Q9Y2B4 290 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 CARD8Q9Y2G2 431 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 SH3GLB1Q9Y371 365 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 PRAMEF27A3QJZ7 478 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 GNGT2O14610 69 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 TFECO14948 347 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 NME2P1O60361 137 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF354AO60765 605 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 MFN2O95140 757 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 RASAL1O95294 804 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 GPIP06744 558 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 FESP07332 822 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 UMPSP11172 480 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 NME2P22392 152 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 GDF1P27539 372 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 RYKP34925 604 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 MEOX1P50221 254 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 P2RX1P51575 399 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 GANABQ14697 944 aaKnown RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 IGFL3Q6UXB1 125 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 DEF8Q6ZN54 512 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 PLEKHM3Q6ZWE6 761 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 MDGA2Q7Z553 956 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 PLCZ1Q86YW0 608 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 DUSP19Q8WTR2 217 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 TMEM234Q8WY98 164 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 PYURFQ96I23 114 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 SEPHS2Q99611 448 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 ANGPTL4Q9BY76 406 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 EXO5Q9H790 373 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 TMEM27Q9HBJ8 222 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 DCAF13Q9NV06 445 aaKnown RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 FLRT3Q9NZU0 649 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 TESQ9UGI8 421 aaKnown RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 CNOT11Q9UKZ1 510 aaKnown RBP11.85□□□□□ -0.51
PHGDH-218ENST00000641491 B3GNT3Q9Y2A9 372 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
PHGDH-218ENST00000641491 FADS1O60427 444 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 TRAPPC6AO75865 159 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 NEURL1O76050 574 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 FABP3P05413 133 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 GP1BBP13224 206 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 ATP6V1B2P21281 511 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 RPS4Y1P22090 263 aaKnown RBP11.84□□□□□ -0.51
PHGDH-218ENST00000641491 ADH7P40394 386 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 KCNJ5P48544 419 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 DNASE1L1P49184 302 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 TAS2R41P59536 307 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 DMTNQ08495 405 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 INAQ16352 499 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 MAPK14Q16539 360 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 BICRALQ6AI39 1079 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 OR5M10Q6IEU7 315 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 FAM180AQ6UWF9 173 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 CARM1Q86X55 608 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 CADM2Q8N3J6 435 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 MDS2Q8NDY4 140 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 OR52E4Q8NGH9 312 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 NR4A3Q92570 626 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms