RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 DPY19L1Q2PZI1 675 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 PDSS1Q5T2R2 415 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 BTLAQ7Z6A9 289 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 MED12LQ86YW9 2145 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 OR10D3Q8NH80 312 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 ST6GALNAC2Q9UJ37 374 aa22.65■■□□□ 1.22
VEGFA-232ENST00000640653 MCTS1Q9ULC4 181 aaKnown RBP22.65■■□□□ 1.22
VEGFA-232ENST00000640653 ANKRD17O75179 2603 aaKnown RBP22.64■■□□□ 1.22
VEGFA-232ENST00000640653 PCNX3Q9H6A9 2034 aa22.64■■□□□ 1.22
VEGFA-232ENST00000640653 PRSS51A0A1B0GVH4 220 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 TMEM120BA0PK00 339 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 GTPBP1O00178 669 aaKnown RBP22.64■■□□□ 1.21
VEGFA-232ENST00000640653 NUDT14O95848 222 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 LINGO3P0C6S8 592 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 PSMA4P25789 261 aaKnown RBP22.64■■□□□ 1.21
VEGFA-232ENST00000640653 P2RX1P51575 399 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 IST1P53990 364 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 RPS26P62854 115 aaKnown RBP22.64■■□□□ 1.21
VEGFA-232ENST00000640653 ESPNLQ6ZVH7 1005 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 ZNF614Q8N883 585 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 CHDHQ8NE62 594 aaPredicted RBP22.64■■□□□ 1.21
VEGFA-232ENST00000640653 OR2V1Q8NHB1 315 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 ADGRG7Q96K78 797 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 SDF2Q99470 211 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 NPAS1Q99742 590 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 SLC39A3Q9BRY0 314 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 CARD8Q9Y2G2 431 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 DTNAQ9Y4J8 743 aa22.64■■□□□ 1.21
VEGFA-232ENST00000640653 ANKHD1Q8IWZ3 2542 aaKnown RBP22.63■■□□□ 1.21
VEGFA-232ENST00000640653 UQCRHLA0A096LP55 91 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 NPIPB9F8W1W9 429 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 CASKO14936 926 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 ADAMDEC1O15204 470 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 AQP8O94778 261 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 SYNGR4O95473 234 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 CD8BP10966 210 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 CD79BP40259 229 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.63■■□□□ 1.211e-7■□□□□ 10.9
VEGFA-232ENST00000640653 OGFOD2Q6N063 350 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 FAM214BQ7L5A3 538 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 POC1BQ8TC44 478 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 NMUR2Q9GZQ4 415 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 OPN3Q9H1Y3 402 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-232ENST00000640653 TMEM185BQ9H7F4 350 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 EXD2Q9NVH0 621 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 THAP1Q9NVV9 213 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 PROCRQ9UNN8 238 aa22.63■■□□□ 1.21
VEGFA-232ENST00000640653 ANKRD28O15084 1053 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 SCN2BO60939 215 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 STX11O75558 287 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 PLGP00747 810 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-232ENST00000640653 UQCRC2P22695 453 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 DNASE1P24855 282 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 ELK4P28324 431 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 ADH6P28332 368 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 WDR4P57081 412 aaKnown RBP22.62■■□□□ 1.21
VEGFA-232ENST00000640653 FOXF1Q12946 379 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 GUSBP1Q15486 140 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 CTU2Q2VPK5 515 aaKnown RBP22.62■■□□□ 1.21
VEGFA-232ENST00000640653 CBLN3Q6UW01 205 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 ANKRD46Q86W74 232 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 CLEC4FQ8N1N0 589 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 MGARPQ8TDB4 240 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 KLHDC3Q9BQ90 382 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 SERHL2Q9H4I8 314 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 ELOVL5Q9NYP7 299 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 ICAM5Q9UMF0 924 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 EMC9Q9Y3B6 208 aa22.62■■□□□ 1.21
VEGFA-232ENST00000640653 GPC6Q9Y625 555 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-232ENST00000640653 E9PBE3 544 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 TNFSF11O14788 317 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 CXCL13O43927 109 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 CPSF4O95639 269 aaKnown RBP22.61■■□□□ 1.21
VEGFA-232ENST00000640653 AGR2O95994 175 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 CGAP01215 116 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 OPN1LWP04000 364 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 POU2F1P14859 743 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 SLC6A8P48029 635 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 KCNJ5P48544 419 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 RNF144AP50876 292 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-232ENST00000640653 SLC18A1P54219 525 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 FAM27E3Q08E93 113 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 ARHGAP11BQ3KRB8 267 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 SPANXN4Q5MJ08 99 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 ATG16L1Q676U5 607 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 HBMQ6B0K9 141 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 ZNF474Q6S9Z5 364 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-232ENST00000640653 C16orf62Q7Z3J2 963 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 SPATA19Q7Z5L4 167 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 LILRA2Q8N149 483 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 MIPOL1Q8TD10 442 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 GMPPAQ96IJ6 420 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-232ENST00000640653 KLHL15Q96M94 604 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 FOXC2Q99958 501 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 LIME1Q9H400 295 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 CCM2LQ9NUG4 571 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-232ENST00000640653 NKIRAS1Q9NYS0 192 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 TESMINQ9Y4I5 508 aa22.61■■□□□ 1.21
VEGFA-232ENST00000640653 A0A0J9YW62 118 aa22.6■■□□□ 1.21
VEGFA-232ENST00000640653 TRPC5OSA6NMA1 111 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms